BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08632 (UTR included)
(1918 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B2B08 533 e-151
>BF01038B2B08
Length = 827
Score = 533 bits (269), Expect = e-151
Identities = 287/293 (97%), Gaps = 2/293 (0%)
Strand = Plus / Minus
Query: 1238 gatccagcgcggtatcccggtgataccgaaatcctttaccaaatccaggatagaggagaa 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gatccagcgcggtatcccggtgataccgaaatcctttaccaaatccaggatagaggagaa 236
Query: 1298 cttgaacatttttgatttcgagctgaccaatgatgaaatgtcaaccatagacggctacaa 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cttgaacatttttgatttcgagctgaccaatgatgaaatgtcaaccatagacggctacaa 176
Query: 1358 tctagatcatcgttgtgtgccttcattgcgattcaaatcctgtacttattatccattctg 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tctagatcatcgttgtgtgccttcattgcgattcaaatcctgtacttattatccattctg 116
Query: 1418 atataaatgttgaagattttatccaaaaacttacatatatatatatattgttatcaaaag 1477
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 115 atataaatgttgaagattttatccaaaaacttacatatatat--atattgttatcaaaag 58
Query: 1478 gatctgttactatactattgttgactagcaccgagtatacaaatgtatataaa 1530
||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 57 gatctgttactatactattnnngattagcaccgagtatacaaatgtatataaa 5
Score = 392 bits (198), Expect = e-109
Identities = 204/206 (99%)
Strand = Plus / Minus
Query: 1033 agataagcccaacattgacccaacataagttagtagatttctgcaagaaactatctgtga 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agataagcccaacattgacccaacataagttagtagatttctgcaagaaactatctgtga 589
Query: 1093 taccgattgcgtacacacctttgggactcttgtccggggcgaggccggaatttattggca 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 taccgattgcgtacacacctttgggactcttgtccggggcgaggccggaatttattggca 529
Query: 1153 aggatgtcatcaaaacggatcctaaattagaaaagatagcagaaaagtatggaaaaacta 1212
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 528 aggatgtcatcaaaacggatcctaaattagagaagatagcagaaaagtacggaaaaacta 469
Query: 1213 aagctcaagtggttttaagatatttg 1238
||||||||||||||||||||||||||
Sbjct: 468 aagctcaagtggttttaagatatttg 443
Score = 184 bits (93), Expect = 3e-46
Identities = 93/93 (100%)
Strand = Plus / Minus
Query: 942 gccaagtcaataggggtgtcaaattttaatgaagaacaactggaaaggttgtacaaccat 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gccaagtcaataggggtgtcaaattttaatgaagaacaactggaaaggttgtacaaccat 768
Query: 1002 gctaatataaaaccgacagttaatcaagttgag 1034
|||||||||||||||||||||||||||||||||
Sbjct: 767 gctaatataaaaccgacagttaatcaagttgag 735
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,759
Number of extensions: 10156
Number of successful extensions: 10156
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10155
Number of HSP's successfully gapped: 3
Length of query: 1918
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1901
Effective length of database: 8,119,229
Effective search space: 15434654329
Effective search space used: 15434654329
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)