BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08641 (UTR included)
(2452 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_548_C1 361 3e-99
>BF14_548_C1
Length = 1701
Score = 361 bits (182), Expect = 3e-99
Identities = 194/198 (97%)
Strand = Plus / Plus
Query: 1551 gatttaaattataacttagttggctggattgattggaatctgtgtctcgaccctcgcgga 1610
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1209 gatttgaattataacttagttggatggattgattggaatctgtgtctcgaccctcgcgga 1268
Query: 1611 ggtcccaactgggcgagtaacttcgctgatgctgctataattgttgacaaaacaaacgac 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 ggtcccaactgggcgagtaacttcgctgatgctgctataattgttgacaaaacaaacgac 1328
Query: 1671 gaattcataaaacagcccatgttctatgcgatgggacatttttcaaagtttattcctcgt 1730
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 gagttcataaaacagcccatgttctatgcgatgggacatttttcaaagtttattcctcgt 1388
Query: 1731 ggttccagaagaataaaa 1748
|||||||||||| |||||
Sbjct: 1389 ggttccagaagattaaaa 1406
Score = 99.6 bits (50), Expect = 2e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 825 tcagacttctcaacccacgcgtacgcttacaacgacttacccgagaatgacactcttctc 884
||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||| | ||||
Sbjct: 483 tcagatttctccacccacgcgtatgcttacaacgacttaccagagaacgacgcctttctt 542
Query: 885 actaatttcaccctcactcctgaagacattatgtacaaaattccaatgat 934
||||| ||||| ||| |||| |||||||| ||||| ||||||||||||||
Sbjct: 543 actaacttcactctcgctcccgaagacatcatgtataaaattccaatgat 592
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 339,154
Number of extensions: 7870
Number of successful extensions: 7870
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7870
Number of HSP's successfully gapped: 2
Length of query: 2452
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2435
Effective length of database: 8,119,229
Effective search space: 19770322615
Effective search space used: 19770322615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)