BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08648 (UTR included)
(1447 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1B03 1122 0.0
>BF01022A1B03
Length = 710
Score = 1122 bits (566), Expect = 0.0
Identities = 640/665 (96%), Gaps = 7/665 (1%)
Strand = Plus / Plus
Query: 789 gaaaataaagaagccgcggaacaattagaggaggtagtccgtcaaggagagatactctta 848
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gaaaataaagaagccgcggaacaattagaggaggtattccgtcaaggagagatactctta 60
Query: 849 gagaaaatacaaggagccctaagtgacatcgcccaatcccagctagacatgcagaaccct 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaaatacaaggagccctaagtgacatcgcccaatcccagctagacatgcagaaccct 120
Query: 909 cagctcatactcaataaggatataaagccccaattatagaaatttaagcctgtatataat 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagctcatactcaataaggatataaagccccaattatagaaatttaagcctgtatataat 180
Query: 969 attagcatttcagaaaatgtcttattgtctacatttaggtagtaaatatcagctgtacta 1028
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 attagcatttcagaaaatgtcatattgtctacatttaggtagtaaatatcagctgtatta 240
Query: 1029 ttaaaatcatattaaatagtactaatataaaattgtcatgaataaccaaaaaggtcttat 1088
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaaaatcatattaaacagtactaatataaaattgtcatgaataaccaaaaaggtcttat 300
Query: 1089 atataccatactgtttgttgtttgaaccttttagtgatgtaggaattttatgttgttttt 1148
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 atataccatactgtttgtcgtttgaaccttttagtgatgtaggaa-tttatgttgttttt 359
Query: 1149 aagacagtacatcaactaactataagatttgttcaatagatattatcttaaattaactca 1208
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 360 aagccagtacatcaactaactataagatgtgttcaatagatattatcttaaattaacgca 419
Query: 1209 atagggtgaataagtttatgtaaatagaatataaaaggatttatactgaaatctaaggag 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atagggtgaataagtttatgtaaatagaatataaaaggatttatactgaaatctaaggag 479
Query: 1269 tttttatttgtttcttgaa------taaagactttaagctatgataggttctcggaagaa 1322
|||||||||||||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 480 tttttatttgtttcttaaataactttaaagactttaagctatgataggttctcagaagaa 539
Query: 1323 ctttacacactatttaggtatataaaagtaatttttttttaaatcaaagttgataaataa 1382
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 540 ctttacacactatttaggtatataaaagtaattatttttttaatcaaagttgataaataa 599
Query: 1383 aatttttattatcggaactgtgtaatttctttaaaatagttccttaaaattcttattaat 1442
||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||
Sbjct: 600 aatttttattatcggaactatgtaatttctttannntngttccttaaacttcttattaat 659
Query: 1443 cctaa 1447
|||||
Sbjct: 660 cctaa 664
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,118
Number of extensions: 5100
Number of successful extensions: 5100
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5099
Number of HSP's successfully gapped: 2
Length of query: 1447
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1430
Effective length of database: 8,119,229
Effective search space: 11610497470
Effective search space used: 11610497470
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)