BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08658 (UTR included)
(3241 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2C02 567 e-161
>BF01056B2C02
Length = 812
Score = 567 bits (286), Expect = e-161
Identities = 300/306 (98%)
Strand = Plus / Plus
Query: 2201 gtttttcgactacgtcggtatagaggaccctcgtatcgccgagttctgtgcagcgacttg 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtttttcgactacgtcggtatagaggaccctcgtatcgccgagttctgtgcagcgacttg 566
Query: 2261 cgagccttcgccccacgctatactgaggacatgtctgttaaggaacttcggcgccggaga 2320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cgagccttcgccccacgctatactgaggacatgtctgttaaggaacttcggcgccggaga 626
Query: 2321 taggcacatccacactgagatgaagaaactggagtatcagaagaccgagctgactatgac 2380
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 627 taggcacatccacactgagatgaagaagctggagtatcagaagaccgagctgactatgac 686
Query: 2381 ggtggggaaacataccgccactgtggtctgcaagaacaagaagaccgccaagcagcgagc 2440
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggtggggaaacataccgctactgtggtctgcaagaacaagaagaccgccaagcagcgagc 746
Query: 2441 gtcgcaggctatactacaggctctacatcctcacgtccgctcgtggggttcgctgctacg 2500
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gtcgcnnnntatactacaggctctacatcctcacgtccgctcgtggggttcgctgctacg 806
Query: 2501 tctcta 2506
||||||
Sbjct: 807 tctcta 812
Score = 521 bits (263), Expect = e-147
Identities = 266/267 (99%)
Strand = Plus / Plus
Query: 1935 agctatctctcagtgttccacgagtacgtctgtcgggccttgcagaaacagcctgtgtac 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctatctctcagtgttccacgagtacgtctgtcgggccttgcagaaacagcctgtgtac 60
Query: 1995 gaatacaaacaactagagaacgcagctacgccgtaccaagctgccgtgtatatcggcggt 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatacaaacaactagagaacgcagctacgccgtaccaagctgccgtgtatatcggcggt 120
Query: 2055 atgcagtacggcgtgggctacgggtcgagtaagagacaggcgaagtacgccgcagctaga 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcagtacggcgtgggctacgggtcgagtaagagacaggcgaagtacgccgcagctaga 180
Query: 2115 gcatccatacacatcctgataccagagatgaagaaccacctcgagccccccgccgccgct 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatccatacacatcctgataccagagatgaagaaccacctcgagccccccgccgccgct 240
Query: 2175 ccgcagaaccccgagactgacttcacg 2201
|||||||| ||||||||||||||||||
Sbjct: 241 ccgcagaatcccgagactgacttcacg 267
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,911
Number of extensions: 4890
Number of successful extensions: 4890
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4890
Number of HSP's successfully gapped: 2
Length of query: 3241
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3223
Effective length of database: 8,109,745
Effective search space: 26137708135
Effective search space used: 26137708135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)