BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08682 (UTR included)
(5194 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1A05 1102 0.0
BF01019A1H08 101 1e-20
BF01049B1F01 96 7e-19
BF14_335_C4 92 1e-17
BF14_335_C2 84 3e-15
BF01016A2B02 76 6e-13
BF01014B2F02 74 2e-12
BF14_335_C5 72 1e-11
BF01044B1A07 70 4e-11
>BF01030A1A05
Length = 568
Score = 1102 bits (556), Expect = 0.0
Identities = 565/568 (99%)
Strand = Plus / Plus
Query: 2756 cgcatatgagctgccctcggacaatggaaacgacggcagcgaccaggacgagtggtctag 2815
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 cgcatatgagctgccctcggacaatggaaacgacggctgcgaccaggacgagtggtctag 60
Query: 2816 tgatgtagaggagagtgactcgggcgtgacggagggcatgctgtccgacgaggacgagag 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatgtagaggagagtgactcgggcgtgacggagggcatgctgtccgacgaggacgagag 120
Query: 2876 gatccgaccgccggctgacgagcgtgacggacgtgacgcacgtgacgcacgtgacggccg 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 gatccgaccgccggctgacgagcgtgacggacgtgacgcacgtgacgcacgtgacggacg 180
Query: 2936 cgacgacagcgacgaccgggacggacgactggcgggctcggtgagtgtggcgcgcggccg 2995
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacgacagcgacgaccgggacggacgactggcgggctcggtgagtgtggcgcgcggccg 240
Query: 2996 gacatcctcctcgctctgcatgcctgcactcttctgctttaagcgttcccgctccgaact 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacatcctcctcgctctgcatgcctgcactcttctgctttaagcgttcccgctccgaact 300
Query: 3056 gctgatgtcggcctcaccgacggcactgtacgagcggcacacgctgccgcgggcgatgtc 3115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgatgtcggcctcaccgacggcactgtacgagcggcacacgctgccgcgggcgatgtc 360
Query: 3116 cgcgcccacctcccgcacgcacacgcacaacgctcaactcgcccatcacgcccacgtctc 3175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgcgcccacctcccgcacgcacacgcacaacgctcaactcgcccatcacgcccacgtctc 420
Query: 3176 caatcagacaacgtacgaggaaggggacagctatctgatagctgttcacaggaagcaggt 3235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caatcagacaacgtacgaggaaggggacagctatctgatagctgttcacaggaagcaggt 480
Query: 3236 gtccggcgagggttacctagtggggggcggaggtcgtgcggcgttgttcggctccccgtt 3295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtccggcgagggttacctagtggggggcggaggtcgtgcggcgttgttcggctccccgtt 540
Query: 3296 ggtggtgtgcactcggcccgggacctcc 3323
||||||||||||||||||||||||||||
Sbjct: 541 ggtggtgtgcactcggcccgggacctcc 568
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 1e-20
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 762 tccatcgcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 412 tccatcgcgttgcagggagaggagcttcaacagtgcctgggagttgcgacccagg 466
>BF01049B1F01
Length = 840
Score = 95.6 bits (48), Expect = 7e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 769 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 634
>BF14_335_C4
Length = 1491
Score = 91.7 bits (46), Expect = 1e-17
Identities = 53/54 (98%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 763 ccatcgcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 ccatcgcgttgcagg-agaggagcttcaacagtgcctgggacttgcgacccagg 1263
>BF14_335_C2
Length = 1827
Score = 83.8 bits (42), Expect = 3e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 767 cgcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 861 cgcgttgcagggagaggagcttcaacagtgcctgggatttgcgacacagg 910
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 6e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 767 cgcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
||||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 222 cgcgttgaagggagaggagcttcaacagtgcctgggaattgcgactcagg 271
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 2e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 768 gcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 571 gcgttgcagggagaggagcttcagcagcgcctaggacttgcgacccagg 619
>BF14_335_C5
Length = 1597
Score = 71.9 bits (36), Expect = 1e-11
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 771 ttgcagggagaggagcttcaacagtgcctgggacttgcga 810
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1556 ttgcacggagaggagcttcaacagtgcctgggacttgcga 1517
>BF01044B1A07
Length = 806
Score = 69.9 bits (35), Expect = 4e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 762 tccatcgcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccagg 816
|||||||||| |||||||||||||||||||| ||| |||||||| |||| |||||
Sbjct: 475 tccatcgcgtggcagggagaggagcttcaactgtgtctgggactcgcgaaccagg 529
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,696
Number of extensions: 13416
Number of successful extensions: 13416
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 13412
Number of HSP's successfully gapped: 9
Length of query: 5194
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5176
Effective length of database: 8,109,745
Effective search space: 41976040120
Effective search space used: 41976040120
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)