BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08685 (UTR included)
(3379 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2H03 1172 0.0
BF01005A2E02 918 0.0
BF01023A1G04 868 0.0
>BF01041A2H03
Length = 749
Score = 1172 bits (591), Expect = 0.0
Identities = 600/603 (99%)
Strand = Plus / Plus
Query: 548 gcttataagagcactaattaagccgcccgacgaagatttaaatgcttcgaaacctaagaa 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcttataagagcactaattaagccgcccgacgaagatttaaatgcttcgaaacctaagaa 206
Query: 608 acctcagcatccatattataagcggcctggtaaaggccacaaccacgactcgtgcgacgc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 acctcagcatccatattataagcggcctggtaaaggccacaaccacgactcgtgcgacgc 266
Query: 668 gtgtagggaaggtggcgatttgatttgttgtgaccgttgcccggctagcttccatcttgg 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtgtagggaaggtggcgatttgatttgttgtgaccgttgcccggctagcttccatcttgg 326
Query: 728 ctgctatgatccgccgctcgaggaaaatgatatccctgctgggtcgtggctgtgtcggga 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgctatgatccgccgctcgaggaaaatgatatccctgctgggtcgtggctgtgtcggga 386
Query: 788 gtgtaaggccggtgacgagaagcagggtgttgtacgctcgattaggttgcagtcaccaac 847
||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 387 gtgtaaggccggtgacgagaagcagggtgttatacgctcgattagggtgctgtcaccaac 446
Query: 848 ggaaaagacagaaggagagaagaaatctagatctcttcgtaacagtcgtacaaactcgct 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggaaaagacagaaggagagaagaaatctagatctcttcgtaacagtcgtacaaactcgct 506
Query: 908 caataagaagaaagtcaaagatgacaacaaagaaaaggaaaaagagaaggaaaatgaaga 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caataagaagaaagtcaaagatgacaacaaagaaaaggaaaaagagaaggaaaatgaaga 566
Query: 968 agtgaaggagaaagagaaggagccggagccggggaaggagttatcaccgatggagatact 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agtgaaggagaaagagaaggagccggagccggggaaggagttatcaccgatggagatact 626
Query: 1028 tgtcaaagcggccaaggtcatgaaccctaaacagtttgagctgcccagggagatgaagat 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgtcaaagcggccaaggtcatgaaccctaaacagtttgagctgcccagggagatgaagat 686
Query: 1088 cccgtgtaactttcccggcaccgagaaagatggtaaatcctcgagtggtatagtgactgt 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cccgtgtaactttcccggcaccgagaaagatggtaaatcctcgagtggtatagtgactgt 746
Query: 1148 gga 1150
|||
Sbjct: 747 gga 749
>BF01005A2E02
Length = 703
Score = 918 bits (463), Expect = 0.0
Identities = 547/576 (94%)
Strand = Plus / Plus
Query: 2777 ggcaggaccaaaaccgttcacgtcatccccggagtggagacctcgtgaacagaaaattgt 2836
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 124 ggcaggaccaaaaccgttcgcgtcatccccggagtggagacctcgtgaactgaaaattgt 183
Query: 2837 aaaaaatttctaccctcagctggaatcttcaaggcttgtttgaggtctgtggttttagct 2896
||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 aaaaattttctagcctcagctggaatcttcaaggcttgtttgaggtctttggttttagct 243
Query: 2897 ttaggacgtaaaactgtcaaagtggtaacagaacgtcgtgatgacgtcattgtgagtgta 2956
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttaggacgtaaaactgccaaagtggtaacagaacgtcgtgatgacgtcattgtgagtgta 303
Query: 2957 ttttttttggacagtcccaatttattccgttgcaagtgtctcgctgtcgacaaattttcc 3016
|||||||||||||||||||||||||||||||| |||||||| |||||| || ||||||||
Sbjct: 304 ttttttttggacagtcccaatttattccgttgtaagtgtcttgctgtctaccaattttcc 363
Query: 3017 ttcgacgcgtacataatcttgatcgtcgtcagctccgccccacctgatgtctttattctg 3076
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 364 ttcgacgcgtacataatcttgatcgtcgtcagctccgccccacctgatgtcttcattctg 423
Query: 3077 gtctatatctattttcttgtatatctcgatttgttcctctcatttccatcacatgtgttc 3136
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 424 gtctatatctattttcttgtatatctcgatttgttcctctcatttccatcacctgtgttc 483
Query: 3137 gctacatctccagtaattggtttcgggtaaagtgtgttatcatcgacgtagctcggacat 3196
||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct: 484 gctacatctccagtaattggtttcgggtaaagtgtgttagtatcgatatagctcctacat 543
Query: 3197 tgccgtgtgatcattgtgctaccaagcttctagttttcctgtcaacgttagatgactgtc 3256
|| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 544 tgtcgtgtgatcattgtactaccaagctcctagttttcctgtcaacgttagatgactgtc 603
Query: 3257 ccttggacgctcacttgtttactgacgtatccctcgttactgtcgtagattttttgctct 3316
|||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||
Sbjct: 604 tcttggacgctcacttgtttattgacgtatcccttgttactgtcgtnnnttttttgctct 663
Query: 3317 gatgcgtcatcagtagaacaatccgtcataaatctt 3352
||||||||||||||||||||||| || |||||||||
Sbjct: 664 gatgcgtcatcagtagaacaatctgttataaatctt 699
>BF01023A1G04
Length = 774
Score = 868 bits (438), Expect = 0.0
Identities = 444/446 (99%)
Strand = Plus / Plus
Query: 1884 aaggtctcttcggagattgcttctaataagagaatgaagctggagaagttgcagctgaag 1943
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtttcttcggagattgcttctaataagagaatgaagctggagaagttgcagctgaag 60
Query: 1944 gaggaggagggagtgcaggaacttttggacgccgtagaggaacagctggaacagatcgat 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaggaggagggagtgcaggaacttttggacgccgtagaggaacagctggaacagatcgat 120
Query: 2004 gaccggctcgtgaaactgctggcctggcagaggttgcagcagatagctgctggcgaggct 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccggctcgtgaaactgctggcctggcagaggttgcagcagatagctgctggcgaggct 180
Query: 2064 gtttccggtcgttggcggcacgcgcccccccctggtcaggtgggcagggctgccatcgct 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttccggtcgttggcggcacgcgcccccccctggtcaggtgggcagggctgccatcgct 240
Query: 2124 ctcagctccgcctcccgagcctcgctggctaagctgggggtgaagacggtacccttaccg 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcagctccgcctcccgagcctcgctggctaagctgggggtgaagacggtacccttaccg 300
Query: 2184 tccgaccttctggcccgggaggacagggaccggatcgcccggctcgtgtttggcgccgca 2243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccgaccttctggcccgggaggacagggaccggatcgcccggctcgtgtttggcgccgca 360
Query: 2244 cccgcgccgccccccgaacccgcaccccgtgaccggctcgccaactctctggtcagggct 2303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccgccccgccccccgaacccgcaccccgtgaccggctcgccaactctctggtcagggct 420
Query: 2304 gttctctgtcatgtgaagtcgttaga 2329
||||||||||||||||||||||||||
Sbjct: 421 gttctctgtcatgtgaagtcgttaga 446
Score = 452 bits (228), Expect = e-126
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 2330 cggcgagggtaactccacactaagctccacggtcgccatgcgcggctcgtcgttggtagc 2389
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 543 cggcgagggtaactccacactaagctccacgttcgccatgcgcggctcgtcgttggtagc 602
Query: 2390 tggcgtggacagcgcctgcgacctccggctggaccccgtgtgctgcaaggtgtccgagat 2449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tggcgtggacagcgcctgcgacctccggctggaccccgtgtgctgcaaggtgtccgagat 662
Query: 2450 acatgccaggatattcagcgacgaggtaaccggtcacttcgaactgatcaactactcgga 2509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acatgccaggatattcagcgacgaggtaaccggtcacttcgaactgatcaactactcgga 722
Query: 2510 gtggggtacgcgagtgaacggagttgtatacgccgcggacgtgtcacagaca 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gtggggtacgcgagtgaacggagttgtatacgccgcggacgtgtcacagaca 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,833
Number of extensions: 5532
Number of successful extensions: 5532
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5530
Number of HSP's successfully gapped: 4
Length of query: 3379
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3361
Effective length of database: 8,109,745
Effective search space: 27256852945
Effective search space used: 27256852945
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)