BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08714 (UTR included)
(1888 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 96 2e-19
BF01049B1F01 90 2e-17
BF14_335_C2 86 2e-16
BF01031B2E06 76 2e-13
BF14_335_C4 74 9e-13
>BF01019A1H08
Length = 504
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1573 tgccgggtccatggcgttgcagggagaggagcttcaacagtgcccgggacttgcgaccca 1632
|||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 405 tgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctgggagttgcgaccca 464
>BF01049B1F01
Length = 840
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1580 tccatggcgttgcagggagaggagcttcaacagtgcccgggacttgcgaccca 1632
|||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 580 tccatgtcgttgcagggagaggagcttcaacagtgcctgggacttgcgaccca 632
>BF14_335_C2
Length = 1827
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1687 tagtgagctcgtaatacttgttgaccttgatggcatgatctttggggatgttggt 1741
|||||||||| |||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1158 tagtgagctcataatacttgttgaccttgatggcatggtttttggggatgttggt 1212
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1573 tgccgggtccatggcgttgcagggagaggagcttcaacagtgcccgggacttgcgac 1629
|||||||||| ||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 849 tgccgggtccgccgcgttgcagggagaggagcttcaacagtgcctgggatttgcgac 905
>BF01031B2E06
Length = 707
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 1686 ttagtgagct-cgtaatacttgttgaccttgatggcatgatctttggggatgttggtt 1742
|||||||||| |||||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 495 ttagtgagcttcgtaatacttattgatcttgatggcatggtctttggggatgttggtt 438
>BF14_335_C4
Length = 1491
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 1572 ttgccgggtccatggcgttgcagggagaggagcttcaacagtgcccgggacttgcgaccc 1631
|||| ||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1324 ttgcggggaccatcgcgttgcagg-agaggagcttcaacagtgcctgggacttgcgaccc 1266
Query: 1632 a 1632
|
Sbjct: 1265 a 1265
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,740
Number of extensions: 4670
Number of successful extensions: 4670
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 4670
Number of HSP's successfully gapped: 6
Length of query: 1888
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1871
Effective length of database: 8,119,229
Effective search space: 15191077459
Effective search space used: 15191077459
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)