BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08734 (UTR included)
(3028 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B2E05 1400 0.0
>BF01022B2E05
Length = 739
Score = 1400 bits (706), Expect = 0.0
Identities = 721/725 (99%), Gaps = 1/725 (0%)
Strand = Plus / Plus
Query: 2062 cgccccgcaccacctcccgctccccgctggcctcaccaacctcaccaccctcgccccctt 2121
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 cgccccgcaccacctcccnttccccgctggcctcaccaacctcaccaccctcgccccctt 74
Query: 2122 cgccgcactccccccgctcaccctcttgcctaactcacaccgctgaaatcaacgatgaca 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 cgccgcactccccccgctcaccctcttgcctaactcacaccgctgaaatcaacgatgaca 134
Query: 2182 aaaacgcctcgcgtcaagctctcctagaacagcgccaccaagagctccttaaaaaacaaa 2241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aaaacgcctcgcgtcaagctctcctagaacagcgccaccaagagctccttaaaaaacaaa 194
Query: 2242 aggcactacaagaacaatacgctagactgcaaatgatccaacgcagtgggcccacattac 2301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aggcactacaagaacaatacgctagactgcaaatgatccaacgcagtgggcccacattac 254
Query: 2302 cgattaacgcccaacctgatcttaaaaaaactggtagcgaatctaatctcctcacaaaat 2361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cgattaacgcccaacctgatcttaaaaaaactggtagcgaatctaatctcctcacaaaat 314
Query: 2362 taaatcttaatctagcaccagctaatatgtccggcagtatgacacatttagcaggagaaa 2421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taaatcttaatctagcaccagctaatatgtccggcagtatgacacatttagcaggagaaa 374
Query: 2422 gt-aaaaaaaaacaaaacgatttaacttcagagcaacaaaatcctaaggagacagtgcct 2480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtaaaaaaaaaacaaaacgatttaacttcagagcaacaaaatcctaaggagacagtgcct 434
Query: 2481 gacgcgatggccactactaataaggtttacgagactgacatactgtgaccgtgtacattt 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gacgcgatggccactactaataaggtttacgagactgacatactgtgaccgtgtacattt 494
Query: 2541 tgttttatatccgttacacctacgttgttatagaccatatatacattagtactttgtatt 2600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 495 tgttttatatccgttacacctacgttgttatagactatatatacattagtactttgtatt 554
Query: 2601 ttattactgtaattattataaattttttaaacgattttgttaacattcgtaatgttatct 2660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttattactgtaattattataaattttttaaacgattttgttaacattcgtaatgttatct 614
Query: 2661 ttgaaacttttttatatttgatacctttttgtataatttagtgtcagtcctatattaaga 2720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttgaaacttttttatatttgatacctttttgtataatttagtgtcagtcctatattaaga 674
Query: 2721 attcgcttgacccatctctaagccttattcccaaacatacgcaagcataattccgcttta 2780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 attcgcttgacccatctctaagccttattcccaaacatacgcaagcataattccgcttta 734
Query: 2781 gctga 2785
|||||
Sbjct: 735 gctga 739
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,009
Number of extensions: 7443
Number of successful extensions: 7443
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7442
Number of HSP's successfully gapped: 1
Length of query: 3028
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3010
Effective length of database: 8,109,745
Effective search space: 24410332450
Effective search space used: 24410332450
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)