BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08767 (UTR included)
(3016 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1C10 1376 0.0
>BF01029A1C10
Length = 722
Score = 1376 bits (694), Expect = 0.0
Identities = 708/713 (99%)
Strand = Plus / Plus
Query: 1807 aatgtgaaatgtgcccgtacgcctcgacgacgctacgtcatctgaagacacacatgctga 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aatgtgaaatgtgcccgtacgcctcgacgacgctacgtcatctgaagacacacatgctga 69
Query: 1867 aacacacggacgagaaacccttcgcttgtgagcagtgcgaccactcgtttaggcagaagc 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aacacacggacgagaaacccttcgcttgtgagcagtgcgaccactcgtttaggcagaagc 129
Query: 1927 aactgctgcgtcgccaccagaatttgtaccacaatccccattacgagccgaagccaccca 1986
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 130 aactgctgcgtcgccaccagaatttgtaccacaatccccactacgagccgaagccaccca 189
Query: 1987 aggagaaaacgcacacgtgtcacgagtgcaagcggaccttcgcccacaagggtaacctga 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aggagaaaacgcacacgtgtcacgagtgcaagcggaccttcgcccacaagggtaacctga 249
Query: 2047 tccgtcatcttgccatccacgaccctgagtctggacaccacgaacgagcactggctctga 2106
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tccgccatcttgccatccacgaccctgagtctggacaccacgaacgagcactggctctga 309
Query: 2107 aaatcggcaggcagaggaagatcaagaccaacacgggaggaccatctcaggttgtggatt 2166
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 310 aaatcggcaggcagaggaagatcaagaccaacacaggaggaccatctcaggttgtggatt 369
Query: 2167 ctgacgacgatatgatgaagctgggcctcaataaggagatcaaacgcggtgaactggtca 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctgacgacgatatgatgaagctgggcctcaataaggagatcaaacgcggtgaactggtca 429
Query: 2227 cagtagctgacggtgatggtcaacagtatgtggtgttagaggtgattcaactcgaggacg 2286
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 430 cagtagctgacggtgatggtcaacagtatgtggtgttagaggtgatacaactcgaggacg 489
Query: 2287 ggacggaacaacaagtggctgtggtggcaccagagttcatggaagaggaacaagaagagg 2346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggacggaacaacaagtggctgtggtggcaccagagttcatggaagaggaacaagaagagg 549
Query: 2347 aagaggaagaagaggaacaggaaattgaaactcctaaacagaaaatattaaacagaacca 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aagaggaagaagaggaacaggaaattgaaactcctaaacagaaaatattaaacagaacca 609
Query: 2407 ttaaactagagaaggaagttgacacatgctttggatttgatgaagaagaggaggaggagg 2466
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttaaactagagaaggaagttgacacatgctttggatttgatgaagaagaggaggaggagn 669
Query: 2467 cagaggaagacataacctacagcgacaaagtagtgttgcgtttagtgtaattt 2519
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cagaggaagacataacctacagcgacaaagtagtgttgcgtttagtgtaattt 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,365
Number of extensions: 5021
Number of successful extensions: 5021
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5016
Number of HSP's successfully gapped: 1
Length of query: 3016
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2998
Effective length of database: 8,109,745
Effective search space: 24313015510
Effective search space used: 24313015510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)