BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08769 (UTR included)
(5617 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2F08 1386 0.0
>BF01062B2F08
Length = 726
Score = 1386 bits (699), Expect = 0.0
Identities = 711/715 (99%)
Strand = Plus / Plus
Query: 426 ctcgaagatgtaataaatttctgttgcgtcgttggggttccagttcataatgaaaaatct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ctcgaagatgtaataaatttctgttgcgtcgttggggttccagttcataatgaaaaatct 71
Query: 486 ttaaaaacacgaatcatgaagacaaaagtccaagctcaacgcaagttcgctcaaggtgcc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttaaaaacacgaatcatgaagacaaaagtccaagctcaacgcaagttcgctcaaggtgcc 131
Query: 546 tatgtgccgcctgcactcaacgtctctggcggaggaatagatagaaggactgagatatca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tatgtgccgcctgcactcaacgtctctggcggaggaatagatagaaggactgagatatca 191
Query: 606 cctataaaagaaaaaagtgtcttccataataaaacatcagcgaggtcgctgttggatatc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cctataaaagaaaaaagtgtcttccataataaaacatcagcgaggtcgctgttggatatc 251
Query: 666 gtagcgtttaaaaatttacacaaacacgcccaacctatagtattgttggaacggctagaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtagcgtttaaaaatttacacaaacacgcccaacctatagtattgttggaacggctagaa 311
Query: 726 aacagtcatcctttgtgctcaaaggatcgatcaaatccaatagccttggccaaaccatca 785
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 312 aacagtcatcctttgtgctcaaaggatcgatcaaatccaatagccttggccaaaccgtca 371
Query: 786 ggcgttacgataaacaaaacaagccatgaaccgatcccaccagtatccaacgcaacacat 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcgttacgataaacaaaacaagccatgaaccgatcccaccagtatccaacgcaacacac 431
Query: 846 agctcgcccatgtcacgtgacagaaccaggaacgctaggatcattacgcccaggctaccc 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agctcgcccatgtcacgtgacagaaccaggaacgctaggatcattacgcccaggctaccc 491
Query: 906 atgcacttgagatcgcgggtagtcacatacggcgagagaaagaaagtcttggtctccaag 965
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgcacttgagatcgagggtagtcacatacggcgagagaaagaaagtcttggtctccaag 551
Query: 966 aagaagaactttgagaatcgcgagaagaatattgttaaaatacggaattcacgtgaattg 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aagaagaactttgagaatcgcgagaagaatattgttaaaatacggaattcacgtgaattg 611
Query: 1026 agaaagaagaaacgacccgacaattattctgacgacttctccattgacgacgacaagcct 1085
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agaaagaagaaacgacctgacaattattctgacgacttctccattgacgacgacaagcct 671
Query: 1086 ctaatgttcttcagacaaaagtcgttgagcttaaagaaagatgcatctatgaagc 1140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctaatgttcttcagacaaaagtcgttgagcttaaagaaagatgcatctatgaagc 726
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 564,390
Number of extensions: 15888
Number of successful extensions: 15888
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15888
Number of HSP's successfully gapped: 1
Length of query: 5617
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5599
Effective length of database: 8,109,745
Effective search space: 45406462255
Effective search space used: 45406462255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)