BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN08771 (UTR included)
         (2353 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01031B1D11                                                          107   8e-23

>BF01031B1D11
          Length = 754

 Score =   bits (54), Expect = 8e-23
 Identities = 195/242 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1332 gcagagaaggcctaccatgaacaactttccgtggctgaaatcacgaatgcatgcttcgaa 1391
            ||||||||||| ||||| ||||| ||  | || ||||| ||||| || || ||||| |||
Sbjct: 497  gcagagaaggcttaccacgaacagctcactgtagctgagatcaccaacgcttgctttgaa 556

                                                                        
Query: 1392 ccggcaaaccaaatggtaaaatgcgatcccaggcacggtaaatacatggcctgctgtatg 1451
            || || ||||| ||||| ||||||||||| || ||||| || |||||||| ||||| |||
Sbjct: 557  ccagccaaccagatggtgaaatgcgatccgagacacggcaagtacatggcttgctgcatg 616

                                                                        
Query: 1452 ttgtaccgcggtgatgttgtgcccaaagacgtcaatgctgctataggcactattaagact 1511
            |||||  | || ||||| || || || || || || || || || | |||||||||||||
Sbjct: 617  ttgtatagaggggatgtggtaccgaaggatgtgaacgcagccatcgccactattaagact 676

                                                                        
Query: 1512 aagcgcactatacaatttgtcgactggtgtcctacaggttttaaagttggtatcaactac 1571
            ||| | ||||| || || || ||||||||||| ||||| || || |||||||||||||||
Sbjct: 677  aagaggactattcagttcgttgactggtgtccaacaggattcaaggttggtatcaactac 736

              
Query: 1572 ca 1573
            ||
Sbjct: 737  ca 738


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,808
Number of extensions: 4610
Number of successful extensions: 4610
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4610
Number of HSP's successfully gapped: 2
Length of query: 2353
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2336
Effective length of database: 8,119,229
Effective search space: 18966518944
Effective search space used: 18966518944
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)