BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08779 (UTR included)
(2911 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1303_C1 2133 0.0
BF01017B2C07 662 0.0
BF14_466_C1 470 e-132
>BF14_1303_C1
Length = 1088
Score = 2133 bits (1076), Expect = 0.0
Identities = 1085/1088 (99%)
Strand = Plus / Plus
Query: 1032 ggcaaagaaggaccaatggtccatatcgccagctgcctaggtaatatcctgtcgtacctc 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaaagaaggaccaatggtccatatcgccagctgcctaggtaatatcctgtcgtacctc 60
Query: 1092 ttcccaaaatatggacggaatgaggcaaagaaacgtgagattctttcggcagcagcggct 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcccaaaatatggacggaatgaggcaaagaaacgtgagattctttcggcagcagcggct 120
Query: 1152 gctggtgtgtcagtggctttcggtgctcccatcggtggagttctctttagtcttgaagag 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctggtgtgtcagtggctttcggtgctcccatcggtggagttctctttagtcttgaagag 180
Query: 1212 gtatcttactactttcccctgaaaaccctctggcgttcatttttctgcgcgttgatagcc 1271
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gtatcttactactttcccctgaaaaccctctggcgttcatttttctgcgcgctgatagcc 240
Query: 1272 gccttcatcttacgatccattaaccccttcggcaacgagcactcggttctcttcttcgtg 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccttcatcttacgatccattaaccccttcggcaacgagcactcggttctcttcttcgtg 300
Query: 1332 gagtacaacaagccctggatattcttcgagttgatacctttcgtcggcttgggaatcatt 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagtacaacaagccctggatattcttcgagttgatacctttcgtcggcttgggaatcatt 360
Query: 1392 ggcggttgcatcgcgacaatattcatcaaggcgaacatttactggtgccgctaccggaag 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcggttgcatcgcgacaatattcatcaaggcgaacatttactggtgccgctaccggaag 420
Query: 1452 tactccaagctgggtcagtacccagtgacggaggtgctggtggtgaccctagtgaccgcg 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tactccaagctgggtcagtacccagtgacggaggtgctggtggtgaccctagtgaccgcg 480
Query: 1512 atcatcgcctatccaaatccatacaccagaatgaacaccagccagttgatctacttgcta 1571
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 481 atcatcgcctatccaaatccatacaccagaatgaacaccagccaattgatctacttgcta 540
Query: 1572 ttcaaccagtgcggcatatctaactcggatcctctgtgtgactataataggaatttcacc 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcaaccagtgcggcatatctaactcggatcctctgtgtgactataataggaatttcacc 600
Query: 1632 gacgtgaataaggcgattgagaaggctgccgctggtcctggtgtgtaccaggctatctgg 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacgtgaataaggcgattgagaaggctgccgctggtcctggtgtgtaccaggctatctgg 660
Query: 1692 ctgttgatgttggcactggtgctgaagttggtgatgaccgtgttcaccttcggcattaaa 1751
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgttgatgttggctctggtgctgaagttggtgatgaccgtgttcaccttcggcattaaa 720
Query: 1752 gtaccctgcgggctgttcatacccagcctcgcgctcggagccatcgccggcaggattgtg 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtaccctgcgggctgttcatacccagcctcgcgctcggagccatcgccggcaggattgtg 780
Query: 1812 ggcattggtgtggaacagctcgcgtataagtatccgaagatctggttattctctggagaa 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggcattggtgtggaacagctcgcgtataagtatccgaagatctggttattctctggagaa 840
Query: 1872 tgttctactggcgatgactgcatcactccagggttgtacgctatggttggtgctgcggct 1931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgttctactggcgatgactgcatcactccagggttgtacgctatggttggtgctgcggct 900
Query: 1932 gtactcggcggtgttacgaggatgaccgtgtctctggtggtgataatgttcgagctgact 1991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtactcggcggtgttacgaggatgaccgtgtctctggtggtgataatgttcgagctgact 960
Query: 1992 ggcggcgtgcggtacatagtgccgctaatggcggcggctatggcgtccaagtgggtgggc 2051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcggcgtgcggtacatagtgccgctaatggcggcggctatggcgtccaagtgggtgggc 1020
Query: 2052 gatgcgttggggcgccagggtatatacgacgcccacatcgcgctgaacggatacccgttc 2111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gatgcgttggggcgccagggtatatacgacgcccacatcgcgctgaacggatacccgttc 1080
Query: 2112 ctggacag 2119
||||||||
Sbjct: 1081 ctggacag 1088
>BF01017B2C07
Length = 721
Score = 662 bits (334), Expect = 0.0
Identities = 342/345 (99%)
Strand = Plus / Plus
Query: 416 aggtgacacagacgagatccccggcatcgggcagtacgatgacttccacaccatcgattg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggtgacacagacgagatccccggcatcgggcagtacgatgacttccacaccatcgattg 436
Query: 476 gcagcgggacatcgctagagatcgcatgcggcatcgatacatcgtgaaaaagcgtcagga 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 437 gcagcgggacatcgctagagatcgcatgcggcatcgatacatcgtgaaaaagcgacagga 496
Query: 536 ttccatctggaacctcattaaaggcgctcacgacgcttggtcgggatgggtgtgcgttct 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttccatctggaacctcattaaaggcgctcacgacgcttggtcgggatgggtgtgcgttct 556
Query: 596 ccttgtgggcgtgtgtacaggggtggtggctggtgtcatcgacattggcgcttcttggat 655
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccttgtgggcgtgtgtacaggagtggtggctggtgtcatcgacattggcgcttcttggat 616
Query: 656 gacggacctcaagttcggtatatgtccccaggcgttctggttcaacagggagcagtgctg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gacggacctcaagttcggtatatgtccccaggcgttctggttcaacagggagcagtgctg 676
Query: 716 ctggtccaacgatgagataacttttgatcacggcaactgctcgca 760
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 677 ctggtccaacgatganataacttttgatcacggcaactgctcgca 721
>BF14_466_C1
Length = 1603
Score = 470 bits (237), Expect = e-132
Identities = 245/249 (98%)
Strand = Plus / Plus
Query: 2090 cgcgctgaacggatacccgttcctggacagcaaggacgagttccagcatacgtcactcgc 2149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcgctgaacggatacccgttcctggacagcaaggacgagttccagcatacgtcactcgc 60
Query: 2150 tgctgacgtcatgcaacccaaacgtaacgagaccctctccgtcataacgcaagactcgat 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 tgctgacgtcatgcaacccaaacgtaacgagaccctctccgtcataacgcaagacnnnnt 120
Query: 2210 gaccgttgatgatgtggagacgctgctgaaagagacagagcataacggatatccggtggt 2269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccgttgatgatgtggagacgctgctgaaagagacagagcataacggatatccggtggt 180
Query: 2270 cgtgtccaaggagtcgcaatacctcgtcggattcgtactgagacgggaccttaacctggc 2329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtgtccaaggagtcgcaatacctcgtcggattcgtactgagacgggaccttaacctggc 240
Query: 2330 catagcgaa 2338
|||||||||
Sbjct: 241 catagcgaa 249
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,158
Number of extensions: 6667
Number of successful extensions: 6667
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6666
Number of HSP's successfully gapped: 3
Length of query: 2911
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2893
Effective length of database: 8,109,745
Effective search space: 23461492285
Effective search space used: 23461492285
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)