BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08788 (UTR included)
(2359 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1210_C1 2076 0.0
>BF14_1210_C1
Length = 1068
Score = 2076 bits (1047), Expect = 0.0
Identities = 1062/1067 (99%)
Strand = Plus / Plus
Query: 1225 gcatgacgcccaccgtacagcaagtggtggaattcgccaagcgtgtgcccggattcaacg 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcatgacgcccaccgtacagcaagtggtggaattcgccaagcgtgtgcccggattcaacg 61
Query: 1285 tgctgccacaggacgaccagcttatacttatcaagctcgggttcttcgaggtgtggctgt 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgctgccacaggacgaccagcttatacttatcaagctcgggttcttcgaggtgtggctgt 121
Query: 1345 ctcgtatgggccggatctcctcggaggctaccatcttattcgatgacgggaactccatcg 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctcgtatgggccggatctcctcggaggctaccatcttattcgatgacgggaactccatcg 181
Query: 1405 accaaacgcagctcgagcttatgtatgatatcccgttcgcgaagtcgatgctggcgtaca 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 accaaacgcagctcgagcttatgtatgatatcccgttcgcgaagtcgatgctggcgtaca 241
Query: 1465 cagctcgcattaacaagatgtgcatcaccgaggacgagatggcgctcttctccgccaccc 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagctcgcattaacaagatgtgcatcaccgaggacgagatggcgctcttctccgccaccc 301
Query: 1525 tgctgctgtcccctcaccggaacgggctgtctgataaggacaaaataaccgctctccaca 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgctgctgtcccctcaccggaacgggctgtctgataaggacaaaataaccgctctccaca 361
Query: 1585 tgtccctaatggaggccttccaattcgtggtgaccgagtccggaatatctgatgtgccgg 1644
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 362 tgtccctaatggaggccttccaatttgtggtgaccgagtccggaatatctgatgtgccgg 421
Query: 1645 cccgcatggaggcattcgcggtggcaactcgcgaagcccgtgtcttgggtctgcagcata 1704
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 422 cccgcatggaggcattcgcggtggcaactcgcgaagcccgtgtcttaggtctgcagcata 481
Query: 1705 acgaccagctgacttggtgccggctcaactggcaacggctggtgctgcccgctctcttct 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acgaccagctgacttggtgccggctcaactggcaacggctggtgctgcccgctctcttct 541
Query: 1765 ctgagatattcgacatcccgaaaggggaggaagaggatccggaggccagtgctctgccgt 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctgagatattcgacatcccgaaaggggaggaagaggatccggaggccagtgctctgccgt 601
Query: 1825 cacctccctcatgctccgtgccccaacagggataaaacccgtcggaggcctcgaatcctt 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cacctccctcatgctccgtgccccaacagggataaaacccgtcggaggcctcgaatcctt 661
Query: 1885 cgaacctactgcttgctctaacttctcacgtggcttgttattgatcccatgtagcgtaac 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cgaacctactgcttgctctaacttctcacgtggcttgttattgatcccatgtagcgtaac 721
Query: 1945 gtagtatgtgcacaattgatttctatataccaagtttaaaaacatagaataatatcgatg 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gtagtatgtgcacaattgatttctatataccaagtttaaaaacatagaataatatcgatg 781
Query: 2005 tttaatatttaatgaattactcaacccacaaacaagtcggtttcaatcggaagagttcga 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tttaatatttaatgaattactcaacccacaaacaagtcggtttcaatcggaagagttcga 841
Query: 2065 ggaattcggggcagacatctttatggtcggaattaggataagaataaatggaagtgaagc 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ggaattcggggcagacatctttatggtcggaattaggataagaataaatggaagtgaagc 901
Query: 2125 aggtttaaggacgacagataatgaatttgttcatcttgagctatttctgccatactgatg 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aggtttaaggacgacagataatgaatttgttcatcttgagctatttctgccatactgatg 961
Query: 2185 attgtgatccaatgagtagcggccgagtttcagtaaggagccgcacttcgccgggtcatt 2244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 962 attgtgatccaatgagtagcggccgagttctggtaaggagccgcacttcgccgggtcatt 1021
Query: 2245 aaaaatgtcttcatccctcattgtggtggtgggttcgagcagatagc 2291
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 aaaaatgtcttcatccctcattgtggtggtgggttcgagcagatagc 1068
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,153
Number of extensions: 3559
Number of successful extensions: 3559
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3559
Number of HSP's successfully gapped: 1
Length of query: 2359
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2342
Effective length of database: 8,119,229
Effective search space: 19015234318
Effective search space used: 19015234318
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)