BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08790 (UTR included)
(2440 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A2G09 979 0.0
BF01010A2E03 563 e-160
>BF01061A2G09
Length = 791
Score = 979 bits (494), Expect = 0.0
Identities = 509/516 (98%)
Strand = Plus / Plus
Query: 494 tcagagtatgtcaaacaacggcagtcgcaagcgctccgctccagcctcgggaagggcctc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcagagtatgtcaaacaacggcagtcgcaagcgctccgctccagcctcgggaagggcctc 334
Query: 554 taaggctcggaagccccgcaagccagcctcagacgaagacagcaatgactcggtgctctc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taaggctcggaagccccgcaagccagcctcagacgaagacagcaatgactcggtgctctc 394
Query: 614 cgaccagccactggagccgcagcgggaaccatccccgctacccgatgaaccaactatcaa 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cgaccagccactggagccgcagcgggaaccatccccgctacccgatgaaccaactatcaa 454
Query: 674 gttacctgaggaattactcaaatccttctacaaaacacccggagtacttttgattagcgg 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gttacctgaggaattactcaaatccttctacaaaacacccggagtacttttgattagcgg 514
Query: 734 tcttgtatcatgggatctcgttgccaaaagagacaacaatccttcaaagaaaacccatcc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tcttgtatcatgggatctcgttgccaaaagagacaacaatccttcaaagaaaacccatcc 574
Query: 794 caatctgtatacttttcacaagtttaccgaacaaaagtacaggctgatagtgagtggatg 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 caatctgtatacttttcacaagtttaccgaacaaaagtacaggctgatagtgagtggatg 634
Query: 854 cagtgccggacattcaattctgatttcggcggagggcgaagcttattcatttggtcgcaa 913
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 635 cagtgccggacattcaattctgatttcggcggnnngcgaagcttattcatttggtcgcaa 694
Query: 914 ctcatgcggtcaactcggcttcggtgacaccacgaccagaaacattccggagcccatccc 973
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 695 ctcatgcggtcaactcggcttcggtgacaccacgaccagaaacattccggnnnccatccc 754
Query: 974 aaccctcaaggggttcaacatcattcatgctgccgt 1009
|||||||||||| |||||||||||||||||||||||
Sbjct: 755 aaccctcaagggtttcaacatcattcatgctgccgt 790
Score = 383 bits (193), Expect = e-106
Identities = 232/241 (96%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 3 tgataacacttaaattaaaaaaaataaatatatatattaatacaaaaaaa-cacatgcaa 61
||||||||||||||| |||||||| | ||||| ||||||||| ||||||| |||||||||
Sbjct: 40 tgataacacttaaataaaaaaaaa-atatatacatattaatataaaaaaaacacatgcaa 98
Query: 62 acgaaagcctgtaaagttgtttgtttgatcttatctttaatattatgtaaggctgatatg 121
||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 99 acgaaagcctgtaaagttgtttgtttgatctgatctctaat-ttatgtaaggctgatatg 157
Query: 122 gtgtaagaaagatcacattataatagtgagcttaacatatcatcctacgcacagggacaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtgtaagaaagatcacattataatagtgagcttaacatatcatcctacgcacagggacaa 217
Query: 182 atgcagcatatttgtctattaattccttaggagccaacaggaaatccttaaatatgatca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atgcagcatatttgtctattaattccttaggagccaacaggaaatccttaaatatgatca 277
Query: 242 g 242
|
Sbjct: 278 g 278
>BF01010A2E03
Length = 806
Score = 563 bits (284), Expect = e-160
Identities = 290/292 (99%)
Strand = Plus / Plus
Query: 2149 tgtgcgtactataagtcggcgctcgcactacgcacgcagcgttagcggttactcgtaaat 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtgcgtactataagtcggcgctcgcactacgcacgcagcgttagcggttactcgtaaat 62
Query: 2209 ctccacagtatagtattaacgggaaacgggaaactttacttttactttactacattcatt 2268
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 63 ctccacagtatagtattaacgggaaacgggaaactttacttttacgttactacattcatt 122
Query: 2269 aggtttttctctgttgctcaaactctttcggttatcataagttgaaatagcggaggtgat 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aggtttttctctgttgctcaaactctttcggttatcataagttgaaatagcggaggtgat 182
Query: 2329 cgcttaactaatgtcacgattcgctagcccactcgatgttatacagtcgcatgaccgact 2388
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 183 cgcttaactaatgtcacgattcgctaccccactcgatgttatacagtcgcatgaccgact 242
Query: 2389 tcacggagcgcgggtcatgttttctatgacacattccacatcactccagcgc 2440
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcacggagcgcgggtcatgttttctatgacacattccacatcactccagcgc 294
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,210
Number of extensions: 4770
Number of successful extensions: 4770
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4768
Number of HSP's successfully gapped: 3
Length of query: 2440
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2423
Effective length of database: 8,119,229
Effective search space: 19672891867
Effective search space used: 19672891867
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)