BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08808 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3409_C1 337 4e-92
>BF14_3409_C1
Length = 952
Score = 337 bits (170), Expect = 4e-92
Identities = 233/254 (91%)
Strand = Plus / Plus
Query: 831 caggaaccaacagaaaaatctaaagtaccaatatgcagagacttcataagagggtcatgt 890
|||||||||||||||||| |||||| | | |||||||||||||||||||| |||||||||
Sbjct: 574 caggaaccaacagaaaaacctaaagaaacgatatgcagagacttcataagggggtcatgt 633
Query: 891 aaacgtcctggaacttgtcgatacgcacataaatatgatctgagccaattagtgggagta 950
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 634 aaacgtcctggaacttgtcgatatgcacataaatttgatctgagccaattagtgggagtg 693
Query: 951 tatacgttttgtcgtgactatcaaacatcagtttgcacatatccaatctgtaaatatgtg 1010
||||| |||||||| | || |||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 694 tatacattttgtcgcaaataccaaacatcggtttgcacgtatcccatctgtaaatacgtg 753
Query: 1011 catgcgactgtatttgaagagcagcacttctataggacaggagtgttgccacctcatgca 1070
|||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 754 catgcgtctgtatttgaagagcatcacttctataggacaggagttttgccacctcatgca 813
Query: 1071 ttggctcatcataa 1084
|| |||||||||||
Sbjct: 814 tttgctcatcataa 827
Score = 238 bits (120), Expect = 3e-62
Identities = 204/232 (87%)
Strand = Plus / Plus
Query: 393 tcagttggcatagatggtgctaactcttcaggccgcagctggctatgaataaaaccataa 452
||||| || |||||||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 109 tcagtgggaatagatggtgctaacttctcatactacagctggctatgaataaaaccataa 168
Query: 453 tcacatcaaataaagaaggcgttggcgatttccaatcaacacgggtaaatgcaggttact 512
|||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 169 tcacataaaataaagaaggcgttggctattaacaaataacacgggtaaatgcaggttact 228
Query: 513 caggcagattcaagttcctctaaaagagtcggagtcgcggaacatttaatcaaatttaga 572
|||||||| | | ||||||||| |||||||||||||||||||||||||| || | |
Sbjct: 229 gaggcagatcaatatagctctaaaagggtcggagtcgcggaacatttaatcaatttcaaa 288
Query: 573 tcatcgccgaattttaaaattatgaaaaaatttataagatccaaaatggatc 624
||||||||||||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 289 tcatcgccgaattttaagaatatgaaaaaatttataagatcaaaaatggatc 340
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,769
Number of extensions: 6222
Number of successful extensions: 6222
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6221
Number of HSP's successfully gapped: 3
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)