BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08853 (UTR included)
(2650 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 123 2e-27
BF14_3210_C1 100 2e-20
BF01016B1E06 92 5e-18
BF01043B1E03 80 2e-14
BF01049B1F01 80 2e-14
BF01014B2F02 76 3e-13
BF01019A1H08 74 1e-12
BF14_335_C4 70 2e-11
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 2e-27
Identities = 171/204 (83%), Gaps = 10/204 (4%)
Strand = Plus / Minus
Query: 2440 acttgggcctgtccggaactaacatcaattcattcttggaatgtactgagaaggcaatcc 2499
|||||||||||||| ||||||||| || ||||||||| ||| ||||| |||| || |
Sbjct: 1066 acttgggcctgtccagaactaacaccagttcattcttcgaacgtacttcgaagacagctc 1007
Query: 2500 tagtaggttcgtttcaaatttggttgagcagagagaggagcttgggcggtggaggggagc 2559
||||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||
Sbjct: 1006 tagtaggttcgtttcaaatttggtt-ag--gagagaggagcttggacggtggaggtgagc 950
Query: 2560 gtttaat------gttagatagcggcctttaaacccacacctgggtcgcaagt-ccaggc 2612
||| | ||||||||| ||| ||||||| ||||||| ||||||| | ||||||
Sbjct: 949 gttatgtacgcgagttagataggggctcttaaacctacacctgtgtcgcaaatcccaggc 890
Query: 2613 actgctgaagctcctctccctgca 2636
|||| |||||||||||||||||||
Sbjct: 889 actgttgaagctcctctccctgca 866
>BF14_3210_C1
Length = 817
Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 1 aaataagctcaattcgccattccgctgtaatacttctcgcgcatttttga 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aaataagctcaattcgccattccgctgtaatacttctcgcgcatttttga 1
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 5e-18
Identities = 110/129 (85%), Gaps = 3/129 (2%)
Strand = Plus / Minus
Query: 2511 tttcaaatttggttgagcagagagaggagcttgggcggtggaggggagcgtttaa--tgt 2568
|||||||||||||| | ||||||||||| |||| ||||||||| |||||||||| ||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcgt 264
Query: 2569 tagatagcggcctttaaacccacacctgggtcgcaagt-ccaggcactgctgaagctcct 2627
||||||| | || ||||||| ||||||||||||| | | || ||||||| ||||||||||
Sbjct: 263 tagatagggccccttaaacctacacctgggtcgctactccccggcactgttgaagctcct 204
Query: 2628 ctccctgca 2636
||| |||||
Sbjct: 203 ctctctgca 195
>BF01043B1E03
Length = 830
Score = 79.8 bits (40), Expect = 2e-14
Identities = 174/215 (80%), Gaps = 9/215 (4%)
Strand = Plus / Plus
Query: 2440 acttgggcctgtccggaactaacatcaattcattcttggaatgtactgagaaggcaatcc 2499
||||| ||||| || ||||||||||||| |||||||||||| |||||| |||||| ||
Sbjct: 252 acttgagcctgcccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcc 311
Query: 2500 tagtaggttcgtttcaaatttggttgagcagagagaggagcttgggcggtggaggggagc 2559
|||||| ||||||||||||||| | |||||||||| ||||| | ||||||| ||||
Sbjct: 312 ---taggtttgtttcaaatttggttaggtagagagaggaccttggacagtggaggtgagc 368
Query: 2560 gtttaa----tgttagatagcgg-cctttaaacccacacctgggtcgcaagt-ccaggca 2613
|||| ||||||||| || |||||||||| | |||||||| |||||| ||| |||
Sbjct: 369 acttaacgcgcgttagataggggccctttaaacctatacctgggttgcaagtcccaagca 428
Query: 2614 ctgctgaagctcctctccctgcagcgatggccccg 2648
|| || | |||||||||| ||| |||||| ||||
Sbjct: 429 ctattggacctcctctcccagcaacgatggacccg 463
>BF01049B1F01
Length = 840
Score = 79.8 bits (40), Expect = 2e-14
Identities = 96/113 (84%), Gaps = 5/113 (4%)
Strand = Plus / Minus
Query: 2529 agagagaggagcttgggcggtggaggggagcgtttaatg----ttagatagcggccttta 2584
|||||||||||||||| |||| |||| | | |||||| | |||||||| | || |||
Sbjct: 702 agagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggcccctta 643
Query: 2585 aacccacacctgggtcgcaagtcc-aggcactgctgaagctcctctccctgca 2636
||| ||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 642 cacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
>BF01014B2F02
Length = 623
Score = 75.8 bits (38), Expect = 3e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 2590 acacctgggtcgcaagtcc-aggcactgctgaagctcctctccctgcagcgatggccccg 2648
||||||||||||||||||| |||| ||||||||||||||||||||||| || ||| ||||
Sbjct: 622 acacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggacccg 563
Query: 2649 gc 2650
||
Sbjct: 562 gc 561
>BF01019A1H08
Length = 504
Score = 73.8 bits (37), Expect = 1e-12
Identities = 65/72 (90%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 2582 ttaaacccacacctgggtcgcaagtcc-aggcactgctgaagctcctctccctgca--gc 2638
||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||| ||
Sbjct: 477 ttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgc 418
Query: 2639 gatggccccggc 2650
||||| ||||||
Sbjct: 417 gatggacccggc 406
>BF14_335_C4
Length = 1491
Score = 69.9 bits (35), Expect = 2e-11
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 2582 ttaaacccacacctgggtcgcaagt-ccaggcactgctgaagctcctctcc 2631
||||||| ||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 1252 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,419
Number of extensions: 5393
Number of successful extensions: 5393
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 5384
Number of HSP's successfully gapped: 9
Length of query: 2650
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2633
Effective length of database: 8,119,229
Effective search space: 21377929957
Effective search space used: 21377929957
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)