BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08863 (UTR included)
(2278 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1A11 186 1e-46
BF01056B1D01 119 2e-26
BF01030A2C06 113 1e-24
BF01018B2A11 111 5e-24
>BF01016B1A11
Length = 786
Score = 186 bits (94), Expect = 1e-46
Identities = 121/130 (93%)
Strand = Plus / Minus
Query: 4 ttttaaatcatttaaatcgggcgtaccatttgaaacttatcataatataagttaaataat 63
|||||||||||||||||| |||||||||||||||| ||||||| ||||||||| | ||||
Sbjct: 157 ttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataagtttagtaat 98
Query: 64 tctcaaaattaaataggctattttatattttttgtatagagcccgtgcgaagccggagct 123
||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||
Sbjct: 97 tctcaaaattaaataggctattttatattttttctaaagtgcccgtgcgaagccggggct 38
Query: 124 ggtacctagt 133
||||||||||
Sbjct: 37 ggtacctagt 28
>BF01056B1D01
Length = 838
Score = 119 bits (60), Expect = 2e-26
Identities = 91/99 (91%), Gaps = 3/99 (3%)
Strand = Plus / Minus
Query: 4 ttttaaatcatttaaatcgggcgtaccatttgaaacttatcataatataagt-taa--at 60
||||||||||||||| || ||||||||||||| || |||||||||||||||| ||| ||
Sbjct: 413 ttttaaatcatttaagtcaggcgtaccatttgcaagttatcataatataagtctaataat 354
Query: 61 aattctcaaaattaaataggctattttatattttttgta 99
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 353 aattctcaaaattaaaaaggctattttatattttttgta 315
>BF01030A2C06
Length = 599
Score = 113 bits (57), Expect = 1e-24
Identities = 86/95 (90%), Gaps = 3/95 (3%)
Strand = Plus / Minus
Query: 4 ttttaaatcatttaaatcgggcgtaccatttgaaacttatcataatataagtt---aaat 60
|||||||||||||||||| ||||||||||||| || ||||||||||||||||| |||
Sbjct: 95 ttttaaatcatttaaatcaggcgtaccatttgcaagttatcataatataagtttaataat 36
Query: 61 aattctcaaaattaaataggctattttatattttt 95
||| |||||||||||| ||||||||||||||||||
Sbjct: 35 aatcctcaaaattaaaaaggctattttatattttt 1
>BF01018B2A11
Length = 733
Score = 111 bits (56), Expect = 5e-24
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 4 ttttaaatcatttaaatcgggcgtaccatttgaaacttatcataatataagttaaataat 63
||||||||||||||||||||||||||| ||||||| ||||||||||||| || || |||
Sbjct: 501 ttttaaatcatttaaatcgggcgtaccgtttgaaaggtatcataatataaatttaaaaat 442
Query: 64 tctcaaaattaaataggctattttatat 91
||||||||||||||||| |||||||||
Sbjct: 441 gctcaaaattaaataggccattttatat 414
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,329
Number of extensions: 7338
Number of successful extensions: 7338
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7336
Number of HSP's successfully gapped: 4
Length of query: 2278
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2261
Effective length of database: 8,119,229
Effective search space: 18357576769
Effective search space used: 18357576769
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)