BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08870 (UTR included)
(2389 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2A10 1269 0.0
>BF01014A2A10
Length = 792
Score = 1269 bits (640), Expect = 0.0
Identities = 656/662 (99%)
Strand = Plus / Plus
Query: 458 agatgttctgatatataaatcgtgatcatagacaaatattaaaatgtggatgataaaaac 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 agatgttctgatatataaatcgtgatcatagacaaatattaaaatgtggatgataaaaac 190
Query: 518 tggtgtgataatactggctgttctgatatcagcatcggctaaatcaaaaaggtacactag 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tggtgtgataatactggctgttctgatatcagcatcggctaaatcaaaaaggtacactag 250
Query: 578 actgcagagcgatcccttgacaacaacgagatgtgaccttatatgttttgatgcgagcaa 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 actgcagagcgatcccttgacaacaacgagatgtgaccttatatgttttgatgcgagcaa 310
Query: 638 agaaaataaatctcagtgtcgatcagcttgtcggtcagagacgcaaaagccaggaacctg 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agaaaataaatctcagtgtcgatcagcttgtcggtcagagacgcaaaagccaggaacctg 370
Query: 698 tcctgatggagacgatcctcgctggatggccgcgtgcctcgaagcctgtaatcatgactc 757
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 371 tcctgatggagacgatcctcgctggatggccgcgtgcctcgaagcctgtaaccatgactc 430
Query: 758 tcaatgcgacggcactcaaagatgttgccagcatggatgcagttccacgtgcagtgagcc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcaatgcgacggcactcaaagatgttgccagcatggatgcagttccacgtgcagtgagcc 490
Query: 818 caccgatttgttgactataccgggccttccagcgatgccgtcaatagaggaaccaaaaga 877
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caccgatttgttgacgataccgggccttccagcgatgccgtcaatagaggaaccaaaaga 550
Query: 878 aagacggcgcgcagttcagattaaatggtcagatggtgtaggtgatgaagcaagatctgt 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagacggcgcgcagttcagattaaatggtcagatggtgtaggtgatgaagcaagatctgt 610
Query: 938 tccaggtagagttctttacctattggaagaacaacattatctttgccccaactacgatga 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tccaggtagagttctttacctattggaagaacaacattatctttgccccaactacgatga 670
Query: 998 atcacgacttggagagtggaatctcctgatgagaaccaataaaaccaaagtgtctctacg 1057
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atcacggcttggagagtggaatctcctgatgagaaccaataaaaccaaagtgtctctacg 730
Query: 1058 taaccagttgaaaccaggtcgttggtatcgtttccgagtggctgctgtaagtgcgtctgg 1117
||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 731 taatcagttgaaaccaggtcgttggtatcgtttccgnntggctgctgtaagtgcgtctgg 790
Query: 1118 ta 1119
||
Sbjct: 791 ta 792
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 tctgaatgttttctcataattccgtttggcctgag 35
|||||||||||||||||||||||||||||||||||
Sbjct: 98 tctgaatgttttctcataattccgtttggcctgag 132
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 380,455
Number of extensions: 9998
Number of successful extensions: 9998
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9998
Number of HSP's successfully gapped: 2
Length of query: 2389
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2372
Effective length of database: 8,119,229
Effective search space: 19258811188
Effective search space used: 19258811188
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)