BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08874 (UTR included)
(1834 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_672_C1 1699 0.0
>BF14_672_C1
Length = 999
Score = 1699 bits (857), Expect = 0.0
Identities = 885/893 (99%), Gaps = 1/893 (0%)
Strand = Plus / Plus
Query: 499 agatggaagatttatcgcagtctactgatttgcaatatcaacaaactgatccgggcattc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 agatggaagatttatcgcagtctactgatttgcaatatcaacaaactgatccgggcattc 167
Query: 559 cgatacatcaacctatggatacggatgcggaaaagattccaaacacaaatatacagccgt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cgatacatcaacctatggatacggatgcggaaaagattccaaacacaaatatacagccgt 227
Query: 619 cagaaaatgccggccctcaaagtggtaaacatgaagaattttccgtcgagaaagttctgg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 cagaaaatgccggccctcaaagtggtaaacatgaagaattttccgtcgagaaagttctgg 287
Query: 679 atagaaggattaaaaatgggaaagtggaatatttacttaaatggaagggttactccgacg 738
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 288 atagaaggattaaaaatggaaaagtggaatatttacttaaatggaagggttactctgacg 347
Query: 739 aagataatacttgggaaccagaagataatctagattgtcctgatttgatatctgcatatg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aagataatacttgggaaccagaagataatctagattgtcctgatttgatatctgcatatg 407
Query: 799 aagaagctcgcttgaaacgggagcgcgaagcagctactattcctgacttggaagaaggtc 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aagaagctcgcttgaaacgggagcgcgaagcagctactattcctgacttggaagaaggtc 467
Query: 859 atttgacacgcaaaagggctaaaagaggagataagaaaaagaaggtcgaggaaattgaaa 918
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 468 atttgacacgcaaaagggctaaaaggggagataagaaaaagaaggtcgaggaaattgaaa 527
Query: 919 aacctagaggtttagccagaggtttgcagccagagaaaattttagccggtcaactgtttc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aacctagaggtttagccagaggtttgcagccagagaaaattttagccggtcaactgtttc 587
Query: 979 atggcacactttacttcttagttaaatggcaggagtgtccagaaatggatgtagttcccg 1038
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 acggcacactttacttcttagttaaatggcaggagtgtccagaaatggatgtagttcccg 647
Query: 1039 gacatgatctcggtcaggcatttccggactttgttatcaattactatgaacagtgtgcgc 1098
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 648 gacatgatctcggtcaggcatttccggactttgttatcaattactatgaacagtgtgcac 707
Query: 1099 cgtttagtgtcagacatcctgttgggagaataccgagacctgctcctgagttgccgccat 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cgtttagtgtcagacatcctgttgggagaataccgagacctgctcctgagttgccgccat 767
Query: 1159 tagaacaaccacaaccagctcccgagactccaatggatgtgagtcaagaagcgagtctcc 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tagaacaaccacaaccagctcccgagactccaatggatgtgagtcaagaagcgagtctcc 827
Query: 1219 cgagcacttcattaacttcaattgaaacagatattccggctgagctgccggaaactcaaa 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 cgagcacttcattaacttcaattgaaacagatattccggctgagctgccggaaactcaaa 887
Query: 1279 cccagccaccaatccccgaagcagacacacagcctatcgaagtaccagtcaattgatgca 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 cccagccaccaatccccgaagcagacacacagcctatcgaagtaccagtcaattgatgca 947
Query: 1339 cacagcacaatgttaatgaatcactgttgttgacttaaaaatgttgaatatat 1391
||||||||| |||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 948 cacagcacattgttcatgaatcactgttgttgactt-aaaatgttgaatatat 999
Score = 192 bits (97), Expect = 1e-48
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 300 tgaacattgacgaatctattctgttatttgtccaataactttattacaatttaaagatat 359
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaacattgacgaatttattctgttatttgtccaataactttattacaatttaaagatat 60
Query: 360 tataatttaactacccagtcttaaatgtacgttgctgtacaacgttaag 408
||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tataattaaactacccagtcttaaacgtacgttgctgtacaacgttaag 109
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,611
Number of extensions: 7227
Number of successful extensions: 7227
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7226
Number of HSP's successfully gapped: 2
Length of query: 1834
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1817
Effective length of database: 8,119,229
Effective search space: 14752639093
Effective search space used: 14752639093
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)