BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08879 (UTR included)
(6313 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1A07 1566 0.0
BF01016B2B02 1269 0.0
BF01011B2D02 1237 0.0
BF01045B2E11 72 1e-11
>BF01055B1A07
Length = 810
Score = 1566 bits (790), Expect = 0.0
Identities = 805/810 (99%)
Strand = Plus / Plus
Query: 2882 ttcgatcaagctgaagcagacgtacgaacacctcctggagaatggtgacatcggggcagc 2941
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ttcgatcaagctgaagcagacgtacgaacacctcctggagaatggcgacatcggggcagc 60
Query: 2942 ctcccgcgtggtaccctcgtcccgcgctcgcccgccgtacctcgatatacgactgctgca 3001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcccgcgtggtaccctcgtcccgcgctcgcccgccgtacctcgatatacgactgctgca 120
Query: 3002 ggccaagaggcagcaggctgagatgagacgaaatcaacgtgaagaagatctccgtgagaa 3061
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccaagaggcagcaggctgaaatgagacgaaatcaacgtgaagaagatctccgtgagaa 180
Query: 3062 tcaccctctattcgacacgccgttgctgatagttccaagggagtcacgttttcgaaaaat 3121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaccctctattcgacacgccgttgctgatagttccaagggagtcacgttttcgaaaaat 240
Query: 3122 ttgtcgcgccatcgtcgacgccagatacgacgcgagactgagggatcccgtcacagggaa 3181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtcgcgccatcgtcgacgccagatacgacgcgagactgagggatcccgtcacagggaa 300
Query: 3182 tgagagaaaagttcattataagagtttccataacttcctcggtctggtcacctacctcga 3241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagagaaaagttcattataagagtttccataacttcctcggtctggtcacctacctcga 360
Query: 3242 ctgggtgatgatcatggtcaccacattatcctgtttatcaatgatgtttgagactcctac 3301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgggtgatgatcatggtcaccacattatcctgtttatcaatgatgtttgagactcctac 420
Query: 3302 gtatagagttatggaaaatttcgtacttcagatagctgaatatgggttcgtcgtgtttat 3361
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtacagagttatggaaaatttcgtacttcagatagctgaatatgggttcgtcgtgtttat 480
Query: 3362 gagtctggagctggctcttaagattctagcggacggcctcttcttcacgcccaaggcata 3421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagtctggagctggctcttaagattctagcggacggcctcttcttcacgcccaaggcata 540
Query: 3422 tctaaaggacgctgccgccgggctcgatgtctttatttatgttgtatcgttgaccttcct 3481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctaaaggacgctgccgccgggctcgatgtctttatttatgttgtatcgttgaccttcct 600
Query: 3482 ctgctggatgccggtgcgcgtgccgcctggcagccctgcccagatgctcatgatacttcg 3541
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 601 ctgctggatgccggtacgcgtgccgcctggcagccctgcccagatgctcatgatactccg 660
Query: 3542 ctgcgttcgtccgctgcgcatcttcacgctcgtgcctcatatgcgtaaagtcgtctacga 3601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgcgttcgtccgctgcgcatcttcacgctcgtgcctcatatgcgtaaagtcgtctacga 720
Query: 3602 actctgccgcggcttcaaagagatcctattggtatcgacgttactcattctgctgatgtt 3661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actctgccgcggcttcaaagagatcctattggtatcgacgttactcattctgctgatgtt 780
Query: 3662 tgtgttcgcgagctatggagtacaattgta 3691
||||||||||||||||||||||||||||||
Sbjct: 781 tgtgttcgcgagctatggagtacaattgta 810
>BF01016B2B02
Length = 744
Score = 1269 bits (640), Expect = 0.0
Identities = 692/708 (97%), Gaps = 1/708 (0%)
Strand = Plus / Plus
Query: 5425 cggaagctcaacaaactgttgccaattccggtcgtacggagatcactgaatcggcatccc 5484
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 cggaagctcaacaaactgttgccaattccggacgtacggagatcactgaatcggcatccc 60
Query: 5485 agcctataatgtcaaacgtcacgtcttctctggactctcaaccgaaacgtgcctccggta 5544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcctataatgtcaaacgtcacgtcttctctggactctcaaccgaaacgtgcctccggta 120
Query: 5545 aagggcagttcaaaagatctggactaccttcagtaactgtaccgaggcctgaaagtccag 5604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggcagttcaaaagatctggactaccttcagtaactgtaccgaggcctgaaagtccag 180
Query: 5605 tgaagaaatatttacaaccaacgctgagcgatccacatccagccctaactaagaaaccag 5664
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 tgaagaaatatttacaaccaacgctgagcgatccacatccagccctcactaagaaaccag 240
Query: 5665 cccctcccaccgtcaagagcaacactcgcggcgctcacaccgctcacacacacacgcaca 5724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccctcccaccgtcaagagcaacactcgcggcgctcacaccgctcacacacacacgcaca 300
Query: 5725 cacagcagcacacacacgcacatacgaacgcggccctacacgacgtgcacgcgtggtggg 5784
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacagcagcacacacacgcacacacgaacgcggccctacacgacgtgcacgcgtggtggg 360
Query: 5785 gggcgcagctcgccgcactcgcacactaggcagatacacacatgaattgggttcatgaat 5844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggcgcagctcgccgcactcgcacactaggcagatacacacatgaattgggttcatgaat 420
Query: 5845 gtgtacaagctcgtggattataaagtgtctttcttacatattactcttctatacaatagc 5904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgtacaagctcgtggattataaagtgtctttcttacatattactcttctatacaatagc 480
Query: 5905 aagcttagtaggaagttcttctaaacggctcattgcaaagagaactgacagacatcgcca 5964
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 aagcttagtaggaagttcttctaaacggctcattgcaaagagaactgccagacatcgcca 540
Query: 5965 cgggaagataaattttaattctcctctaagttaaaatttctttgttccttttcatttctg 6024
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 541 cgggaagataaattttaattctcctccaagttaaaacttctttgttccttttcatttctg 600
Query: 6025 tctcttattatatacataacacatacataacaacttaaaacatactctactatattttgt 6084
||||||||||||||||| | | || || |||||| |||||||||||||||| |||||||
Sbjct: 601 tctcttattatatacat-atatgtatattacaactaaaaacatactctactacattttgt 659
Query: 6085 atgctataattctctagtttatatcttatttaaaaaaatatgttgaat 6132
||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 660 atgttataattctctagtttatatcttatttaaaaaaataagttgaat 707
>BF01011B2D02
Length = 766
Score = 1237 bits (624), Expect = 0.0
Identities = 725/760 (95%), Gaps = 12/760 (1%)
Strand = Plus / Plus
Query: 5293 ggctcgaaggatgtcttaaaaaaatacgagccaacagcagcaagcagcagacaagtctta 5352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctcgaaggatgtcttaaaaaaatacgagccaacagcagcaagcagcagacaagtctta 60
Query: 5353 tagctgggctgaggaagaccaacgagcagccagttgactttgccacagagaaagaaaaag 5412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagctgggctgaggaagaccaacgagcagccagttgactttgccacagagaaagaaaaag 120
Query: 5413 agaaacaggaagcggaagctcaacaaactgttgccaattccggtcgtacggagatcactg 5472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaacaggaagcggaagctcaacaaactgttgccaattccggtcgtacggagatcactg 180
Query: 5473 aatcggcatcccagcctataatgtcaaacgtcacgtcttctctggactctcaaccgaaac 5532
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 aatctgcatcccagcctataatgtcaaacgtcacgtcttctctggattctcaaccgaaac 240
Query: 5533 gtgcctccggtaaagggcagttcaaaagatctggactaccttcagtaactgtaccgaggc 5592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgcctccggtaaagggcagttcaaaagatctggactaccttcagtaactgtaccgaggc 300
Query: 5593 ctgaaagtccagtgaagaaatatttacaaccaacgctgagcgatccacatccagccctaa 5652
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 ctgaaagtccagtgaagaaatatttacaaccaacgctgagcgatccacatccagccctca 360
Query: 5653 ctaagaaaccagcccctcccaccgtcaagagcaacactcgcggcgctcacaccgctcaca 5712
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 361 ctaagaaaccagcccctcccaccgtcaagagcaacactcgtggcgctcacaccgctcaca 420
Query: 5713 cacacacgcacacacagcagcacacacacgcacatacgaacgcggccctacacgacgtgc 5772
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 421 cacacacgcacacacagcaacacacacacgcacacacgaacgcggccctacacgacgtgc 480
Query: 5773 acgcgtggtggggggcgcagctcgccgcactcgcacactaggcagatacacacatgaatt 5832
||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 481 acgcgtggtggggggcgcagctcgccgcactcgcacactaggc--acacacacataaatt 538
Query: 5833 gggttcatgaatgtgtacaagctcgtggat----------tataaagtgtctttcttaca 5882
||||||| |||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 539 gggttcaagaatgtatacaagctcgtggattatacacttctataaagtgtctttcttaca 598
Query: 5883 tattactcttctatacaatagcaagcttagtaggaagttcttctaaacggctcattgcaa 5942
||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 599 tattactattctatacaatagcaagcttagaaggaagaacttctaaacggctcattgcaa 658
Query: 5943 agagaactgacagacatcgccacgggaagataaattttaattctcctctaagttaaaatt 6002
||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||| ||| |
Sbjct: 659 agagaaccaacagacatcgccacgggaagatacattttaattttcctccaagtttaaact 718
Query: 6003 tctttgttccttttcatttctgtctcttattatatacata 6042
||||||||||| |||||||||||||||||||||||||||
Sbjct: 719 tctttgttcctnntcatttctgtctcttattatatacata 758
>BF01045B2E11
Length = 505
Score = 71.9 bits (36), Expect = 1e-11
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 6266 agaacattcatcgtagggggtgtggtcgcgccctaaattatattgtta 6313
||||||||| ||||||||||||||||| ||||||||| ||||||||||
Sbjct: 1 agaacattcgtcgtagggggtgtggtcccgccctaaactatattgtta 48
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 111,811
Number of extensions: 14103
Number of successful extensions: 14103
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 14098
Number of HSP's successfully gapped: 6
Length of query: 6313
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6295
Effective length of database: 8,109,745
Effective search space: 51050844775
Effective search space used: 51050844775
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)