BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08880 (UTR included)
(3155 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A2D09 531 e-150
>BF01018A2D09
Length = 664
Score = 531 bits (268), Expect = e-150
Identities = 274/276 (99%)
Strand = Plus / Plus
Query: 2666 atcccatacgtctcgtcgtctccgcatcataggtctctccacggccctcgccaacgctaa 2725
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 1 atcccatacgtctcgtcgtctccgtatcataggtctctccacagccctcgccaacgctaa 60
Query: 2726 ggatctagccaactggctgaacattggagaaattggattatacaacttcaggccgtccgt 2785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatctagccaactggctgaacattggagaaattggattatacaacttcaggccgtccgt 120
Query: 2786 cagacctgtcccgttggaggtccatatatcaggccacgcgggtcgtcactactgtccgcg 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagacctgtcccgttggaggtccatatatcaggccacgcgggtcgtcactactgtccgcg 180
Query: 2846 gatgatgtctatgaacaaacccacattcagcgctatcagaacacactcccctgcctcacc 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgatgtctatgaacaaacccacattcagcgctatcagaacacactcccctgcctcacc 240
Query: 2906 agctctggtcttcgtgtccagtagacggcagaccag 2941
||||||||||||||||||||||||||||||||||||
Sbjct: 241 agctctggtcttcgtgtccagtagacggcagaccag 276
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,451
Number of extensions: 4755
Number of successful extensions: 4755
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4755
Number of HSP's successfully gapped: 1
Length of query: 3155
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3137
Effective length of database: 8,109,745
Effective search space: 25440270065
Effective search space used: 25440270065
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)