BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08885 (UTR included)
(4306 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3511_C1 1907 0.0
BF01019B2H01 1174 0.0
BF01057B2A11 78 1e-13
BF01014B1E09 74 2e-12
>BF14_3511_C1
Length = 1007
Score = 1907 bits (962), Expect = 0.0
Identities = 994/1007 (98%)
Strand = Plus / Plus
Query: 2583 ggtagtaccccgttcccggcggcgtcccccgccgctcactcgtacaccccgtctccagcc 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtagtaccccgttcccggcggcgtcccccgccgctcactcgtacaccccgtctccagcc 60
Query: 2643 cacacgccgtactcgcaccactcgtccccagcgccggccccagcccctcacacgccgtat 2702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacacgccgtactcgcaccactcgtccccagcgccggccccagcccctcacacgccgtat 120
Query: 2703 gattcacatcattttgccaatcagggaagtggatcgagcggctcgggcggcggctcgggc 2762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattcacatcattttgccaatcagggaagtggatcgagcggctcgggcggcggctcgggc 180
Query: 2763 tcgggctacggtgcagagttgtctagcgacatcggtgcggcgatatcgtccccggcgccc 2822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgggctacggtgcagagttgtctagcgacatcggtgcggcgatatcgtccccggcgccc 240
Query: 2823 gtgtcgccagcctgcgccaccctggacttcgagccgccccgtgatgactcgccaatgggc 2882
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 241 gtgtcgccagcctgcgccaccctggacttcgagccgccccgtgacgactcgccgatgggc 300
Query: 2883 agcacagacatgcatccgggcagcaacagcaactcctcgctgtccgactacaataagcag 2942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcacagacatgcatccgggcagcaacagcaactcctcgctgtccgactacaataagcag 360
Query: 2943 agtaatccgggcggaggcgagatgtcgccggccggtgtgggcgcgggctcgttcgggggc 3002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtaatccgggcggaggcgagatgtcgccggccggtgtgggcgcgggctcgttcgggggc 420
Query: 3003 gctctgtacgacgacacgagactagcgtacagcgacaaacccgactatcattaccaggaa 3062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctctgtacgacgacacgagactagcgtacagcgacaaacccgactatcattaccaggaa 480
Query: 3063 caaggcaatggtgtgggagacagccctcggttagatcaattacatcaacatccctccatg 3122
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaggcaatggtgtgggagacagtcctcggttagatcaattacatcaacatccctccatg 540
Query: 3123 tatcctagcaattttaacaggtcaacgcctaccggagacagcgactcgggcttcggccgc 3182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatcctagcaattttaacaggtcaacgcctaccggagacagcgactcgggcttcggccgc 600
Query: 3183 ggctcgttccgggcgcccgagttacaccaccctccgcctgcaggttcccccagtgagtac 3242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggctcgttccgggcgcccgagttacaccaccctccgcctgcaggttcccccagtgagtac 660
Query: 3243 agcggcggaggcgagtctggtaacggaactcctaaaagcaaatcacaggacgtggcttcc 3302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agcggcggaggcgagtctggtaacggaactcctaaaagcaaatcacaggacgtggcttcc 720
Query: 3303 aagtcgctatcgggactggagtcgctcgttgaccagataccttccatagcggacggcccg 3362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagtcgctatcgggactggagtcgctcgttgaccagataccttccatagcggacggcccg 780
Query: 3363 gcgggcgtgggcggtgtgggcggcgtgggcgcggccgtcggcagcgtgggcgaacagggc 3422
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 781 gcgggcgtgggcggtgtgggcggcgtgggcgcggcagtcggcagcgtgggcgaacagggc 840
Query: 3423 agcgccccaccagtgccctcgctgccagagtacacgccagcgttatacccgccatacccg 3482
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 841 agcgccccaccagtgccctcgctgccggagtacacgccagcgttatacccgccatacccg 900
Query: 3483 gcgtacggcgcaccggcatacggaaataacagctacggcgctccgtttgtcggttacggc 3542
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 901 gcgtacggcgcaccggcatacggaaataacagctacggcgctccgnnngtcggttacggc 960
Query: 3543 ggtggttggggcacccagctgatgcggccggcgccgggctacttacc 3589
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 961 nnnngttggggcacccagttgatgcggccggcgccgggctacttacc 1007
>BF01019B2H01
Length = 643
Score = 1174 bits (592), Expect = 0.0
Identities = 625/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1943 gggcgtcggcagtgtggggggagtgagcaacgtcagca-gtggtgtcatgtacggtgtgc 2001
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 9 gggcgtcggcagtgtggggggagtgagcaacgtcagcnngcggtgtcatgtacggtgtgc 68
Query: 2002 agcatcagcaccagcagcagatgtccgactcgtcgccgtactaccaacctaacaatagcg 2061
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 agcatcagcaccagcagcaaatgtccgactcgtcgccgtactaccaacctaacaatagcg 128
Query: 2062 gcggtatggattctccgttagacgtgggcggaggtctgggcatgtcccgtggttacggtt 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcggtatggattctccgttagacgtgggcggaggtctgggcatgtcccgtggttacggtt 188
Query: 2122 cacctggcggcgtgggcgtgggcggcgtgggcttcgcggcgtcaccacggcacgcgcact 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cacctggcggcgtgggcgtgggcggcgtgggcttcgcggcgtcaccacggcacgcgcact 248
Query: 2182 cgtacgcgtcaccgcgctcacagccatactcacctggaccacagagactcgctgctacgc 2241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cgtacgcgtcgccgcgctcacagccatactcacctggaccacagagactcgctgctacgc 308
Query: 2242 cgcaaccacagcaacagtttccatcgagcccggcggcattttcggcgccatcgccgccac 2301
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 309 cgcaaccacagcaacagtttccatcgagcccggcggcattttcggcgccatcgccgccgc 368
Query: 2302 gtgctgggtacggttcacccggagtgggcggtgtgggcgtcgtgggcggtgtggggggtg 2361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtgctgggtacggttcacccggagtgggcggtgtgggcgtcgtgggcggtgtggggggtg 428
Query: 2362 tgggcggatcgcgcgggttcgcggctcgttccccactgtatgcgagctccccggccgctt 2421
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgggtggatcgcgcgggttcgcggctcgttccccactgtatgcgagctccccggccgctt 488
Query: 2422 accgccagcagccgagcccagccgcccagccccagccaaggtttacacacgatgggatgc 2481
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 489 accgccagcagccgagtccagccgcccagccccaaccaaggtttacacacgatgggatgc 548
Query: 2482 ctttcgctagagacacacagagcggttcagtatcaacttccggcgggggtttctcgtgtt 2541
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctttcgctagggacacacagagcggttcagtatcaacttccggcgggggtttctcgtgtt 608
Query: 2542 cccccggcgtggcgggcgtggtgggggtgggggtg 2576
|||||||||||||||||||||||||||||||||||
Sbjct: 609 cccccggcgtggcgggcgtggtgggggtgggggtg 643
>BF01057B2A11
Length = 843
Score = 77.8 bits (39), Expect = 1e-13
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1746 caacagcaacaacaacagcagcagcagcaacagcaacaacaacaaca 1792
||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 269 caacagcaacaacaacagcagcagcagcagcaacaacaacaacaaca 315
>BF01014B1E09
Length = 866
Score = 73.8 bits (37), Expect = 2e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1749 cagcaacaacaacagcagcagcagcaacagcaacaacaacaacagcaacagca 1801
|||||| | ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 798 cagcaaaagcaacagcagcagcagcaacagcagcaacaacaacagcagcagca 850
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,802
Number of extensions: 6026
Number of successful extensions: 6026
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6016
Number of HSP's successfully gapped: 4
Length of query: 4306
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4288
Effective length of database: 8,109,745
Effective search space: 34774586560
Effective search space used: 34774586560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)