BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08890 (UTR included)
(2452 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2803_C1 1263 0.0
>BF14_2803_C1
Length = 1270
Score = 1263 bits (637), Expect = 0.0
Identities = 688/705 (97%)
Strand = Plus / Plus
Query: 1746 ccacacgtgtgcccgcactgtgggaaggcattctcccagaggtcgacgctagttatacat 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccacacgtgtgcccgcactgtgggaaggcattctcccagaggtcgacgctagttatacat 61
Query: 1806 gagagataccacagcggcgctcgtccgtacacttgcggtttgtgcggtcggggctttgtg 1865
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagagataccatagcggcgctcgtccgtacacttgcggtttgtgcggtcggggctttgtg 121
Query: 1866 gctaagggtcttctgtcgatgcacctgaagagcacttgcgtagatacaacgcaggctaga 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gctaagggtcttctgtcgatgcacctgaagagcacttgcgtagatacaacgcaggctaga 181
Query: 1926 tcgcaacaaaagttgaattcgcgatagcaaattgagaatctgtggcgtcctgaaaactaa 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcgcaacaaaagttgaattcgcgatagcaaattgagaatctgtggcgtcctgaaaactaa 241
Query: 1986 gttacagaatcatgtgacaatacattcttcaattcccataataactttaaaaccaccgat 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttacagaatcatgtgacaatacattcttcaattcccataataactttaaaaccaccgat 301
Query: 2046 gacacatccgtcgcttcaccccggggagtctgtttttaattcctatttttattacctctt 2105
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 302 gacacatccgtcgcttcaccccggcgagtctgcttttaattcctatttttattacctctt 361
Query: 2106 taatataagttagttagattaaatttaaccgacttcaaagaaagatagtactgtgtttgt 2165
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 362 taatataagttagttagattaaatttaaccgacttcaaagaaagatagtattgtgtttga 421
Query: 2166 gttaactatcataaggattgtataattctatcgggaatcctgagttacttgtgttccagc 2225
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttaactaacataaggattgtataattctatcgggaatcctgagttacttgtgttccagc 481
Query: 2226 acagtttgttatcgaacgattgttataaaattccaattttttttttttattctgcaacta 2285
|||||||||||||||||||||||||||||||| || | | ||| ||||||||||||||||
Sbjct: 482 acagtttgttatcgaacgattgttataaaatttcattatatttattttattctgcaacta 541
Query: 2286 aattatagacaatcgaaaaaaatactcaagaaattaagtttgtatgtctctatatatgta 2345
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gattatagacaatcgaaaataatactcaagaaattaagtttgtatgtctctatatatgta 601
Query: 2346 tacacatacaaattggttcagtcatctattcgctgtgttatgtgaatatcagaagtgcag 2405
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 602 tacacatactaattggttcagtcgtctattcgctgtgttatgtgaatatcagaagtgcag 661
Query: 2406 attcaacaattaaactcattgtaacaatgttataaaaggttagta 2450
||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 662 attcaaccattaaactcattgtaacaacgttataaaaggttagta 706
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,741
Number of extensions: 18143
Number of successful extensions: 18143
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18143
Number of HSP's successfully gapped: 1
Length of query: 2452
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2435
Effective length of database: 8,119,229
Effective search space: 19770322615
Effective search space used: 19770322615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)