BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08893 (UTR included)
(1876 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B1H04 1261 0.0
>BF01029B1H04
Length = 757
Score = 1261 bits (636), Expect = 0.0
Identities = 648/652 (99%)
Strand = Plus / Plus
Query: 499 tgatgccggaccaggaattggaatggaacacagccctcgttccgataaaggattggttgg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgatgccggaccaggaattggaatggaacacagccctcgttccgataaaggattggttgg 165
Query: 559 tcaaacaacctcatctacccaacgatataggtgatgtgctccttcgtcgattctacgtga 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tcaaacaacctcatctacccaacgatataggtgatgtgctccttcgtcgattctacgtga 225
Query: 619 gctgcgatcgttctatggagcgagtaaagagaacgattgatctattcttcacaatccgat 678
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 226 gctgcgatcgttctatggagcgagtaaagagaacgattgatctgttcttcacaatccgat 285
Query: 679 caacagcaccagaactgttccttaaaagggacccctgggcgccggaaatacgaagagtct 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 caacagcaccagaactgttccttaaaagggacccctgggcgccggaaatacgaagagtct 345
Query: 739 ttgaaataactgacatgttgccgctaccaaataagacgaaggagaactacaaagtgtttg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgaaataactgacatgttgccgctaccaaataagacgaaggagaactacaaagtgtttg 405
Query: 799 tataccgtctgaacaatcccgactacgatctgttcaacttcatagacgctatcaaggtgt 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tataccgtctgaacaatcccgactacgatctgttcaacttcatagacgctatcaaggtgt 465
Query: 859 tcttcatgttggctgacactcgactcacagaggaagacgatattccttcaggagaaatac 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcttcatgttggctgacactcgactcacagaggaagacgatattccttcaggagaaatac 525
Query: 919 cgatattcgatgctacgaacgtcaccctcaaattcatgggaaaaatcaatctgacagtac 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cgatattcgatgctacgaacgtcaccctcaaattcatgggaaaaatcaatctgacagtac 585
Query: 979 tcaggaaatatatgctttacacacaggaagctctgccaataagactaaaacaggttcata 1038
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 586 tcaggaaatatatgctttacacacaggaagctctgccaataagactaaagcaggttcata 645
Query: 1039 taataaacgctccgccttacatcgggaagttatacgcgatttgcaaaccgttcatcaaca 1098
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 646 taataaacgctccgccttacatcgggaagttatacgcgatctgcaaaccgttcatcaaca 705
Query: 1099 ctgaggtcgctaagctgataaaattccacgagccgaattcaagcacgttgta 1150
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctgaggtcgctaaactgataaaattccacgagccgaattcaagcacgttgta 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,494
Number of extensions: 6991
Number of successful extensions: 6991
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6991
Number of HSP's successfully gapped: 1
Length of query: 1876
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1859
Effective length of database: 8,119,229
Effective search space: 15093646711
Effective search space used: 15093646711
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)