BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08898 (UTR included)
(2332 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3439_C1 1631 0.0
>BF14_3439_C1
Length = 855
Score = 1631 bits (823), Expect = 0.0
Identities = 847/855 (99%)
Strand = Plus / Plus
Query: 627 gggactcctcgccgatggccacgcaaggaacgctcagtcaaaccagagaatactgcattt 686
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggactcctctccgatggccacgcaaggaacgctcagtcaaaccagagaatactgcattt 60
Query: 687 tcatatgactcggatgattccagccagtccagcagcgcctctggatcaaataaatcaagt 746
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 tcatatgactcggatgattccagccagtccagcagcgcctccggatcaaataaatcaagt 120
Query: 747 gaaaaaggtgaggtgcccgtccgtggtgagggtcgtgagtggcgcggccggggtcgccgg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaaaggtgaggtgcccgtccgtggtgagggtcgtgagtggcgcggccggggtcgccgg 180
Query: 807 gagccccgccagcgtcgtatagcgcccgagcgctacctggccgcctcttaccccttccag 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagccccgccagcgtcgtatagcgcccgagcgctacctggccgcctcttaccccttccag 240
Query: 867 gtgaagttcacaccagacaacctcctcaacggttcggagtgggacacgctgtctcaggag 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgaagttcacaccagacaacctcctcaacggttcggagtgggacacgctgtctcaggag 300
Query: 927 atatgggacaagttcgtaaagtcccagcagacggaagagacgttcaggaagaagatgaac 986
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 atatgggacaagttcgtaaagtcccagcagacggaggagacgttcaggaagaagatgaac 360
Query: 987 ctgtggcgctacctgtacatcagcatcaaatcgatgttcccgagatacgggttgtacgtg 1046
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 ctgtggcgctacctgtacatcagcatcaaatcgatgttcccgcgatacgggttgtacgtg 420
Query: 1047 gtgggctccaccatgtcgggcttcgggctggactcgtccgacatggacctctgtctgcac 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgggctccaccatgtcgggcttcgggctggactcgtccgacatggacctctgtctgcac 480
Query: 1107 gtgcgggcgctggccgagctcgagccccgcgcgcacgccctgctgcatctcaactacata 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgcgggcgctggccgagctcgagccccgcgcgcacgccctgctgcatctcaactacata 540
Query: 1167 ctcagccacatcaggagcttcgaccccggtgcggaattaattcaggcgaaggtccccata 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcagccacatcaggagcttcgaccccggtgcggaattaattcaggcgaaggtccccata 600
Query: 1227 ctgaagttccgcgacgaaagaaacggactccaagtggacttgaactgtaacaacgtggtc 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgaagttccgcgacgaaagaaacggactccaagtggacttgaactgtaacaacgtggtc 660
Query: 1287 ggcatcaggaacaccaacctactgtactgttactccaggatggactggcgcgtccggccg 1346
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 661 ggcatcaggaacaccaacctactgtactgttactccaggatggactggcgcgtccgtccg 720
Query: 1347 ctggtggccatcacgaagctgtgggcgcgcgctcaccgcatcaacgacgccaggagacgc 1406
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctggtggcaatcacgaagctgtgggcgcgcgctcaccgcatcaacgacgccaggagacgc 780
Query: 1407 acgctgtcctcgtacgcgctcacactcatggtcattcacttcctgcaatgcgggaccagt 1466
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 781 acgctgtcctcgtacgcgctcacactcatggtcatacacttcctgcaatgcgggaccagt 840
Query: 1467 ccggcagtgttgtgt 1481
||||| |||||||||
Sbjct: 841 ccggcggtgttgtgt 855
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,743
Number of extensions: 5980
Number of successful extensions: 5980
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5980
Number of HSP's successfully gapped: 1
Length of query: 2332
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2315
Effective length of database: 8,119,229
Effective search space: 18796015135
Effective search space used: 18796015135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)