BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08901 (UTR included)
(2413 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2E08 1598 0.0
>BF01051B2E08
Length = 810
Score = 1598 bits (806), Expect = 0.0
Identities = 809/810 (99%)
Strand = Plus / Plus
Query: 1010 gccgagggctggagataatctgtgtatattaaaaaaactgaagctgagattaacaaagga 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgagggctggagataatctgtgtatattaaaaaaactgaagctgagattaacaaagga 60
Query: 1070 tgttcggaatcgctatcccaatagaatgaagtacagagctgtgagactactaccattacc 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttcggaatcgctatcccaatagaatgaagtacagagctgtgagactactaccattacc 120
Query: 1130 gaatgagtcaaatgattacaagatatctttgtctccgctggagccgggcaaggatctgct 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatgagtcaaatgattacaagatatctttgtctccgctggagccgggcaaggatctgct 180
Query: 1190 gtttcatgtgagagtttaccgacccttcacttacagcggcagagatcagaatgaaaagag 1249
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 gtttcatgtgagagtttaccgacccttcacttacagcggcagagatcagaatgacaagag 240
Query: 1250 gtattctcgtcactcattgttcagtagtgacatgataatgttggggagacagaagttgac 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtattctcgtcactcattgttcagtagtgacatgataatgttggggagacagaagttgac 300
Query: 1310 ggttctcagagacaggatagtttgtgccaatgatgtcgggatgagagttgatgtatctga 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttctcagagacaggatagtttgtgccaatgatgtcgggatgagagttgatgtatctga 360
Query: 1370 tcagccggatgaactgccgactagttctgcaagggatctgttcccgtctaatttcctgtt 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcagccggatgaactgccgactagttctgcaagggatctgttcccgtctaatttcctgtt 420
Query: 1430 catcaataataagttctatgtggacacgcggccagggtgtcgcgacctgtccgagccgct 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catcaataataagttctatgtggacacgcggccagggtgtcgcgacctgtccgagccgct 480
Query: 1490 caggctttgggcctccactagaggactcggggtcttcgaccacactcacatggatgtaag 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caggctttgggcctccactagaggactcggggtcttcgaccacactcacatggatgtaag 540
Query: 1550 gctggatgagctggaggtgaaacttggacatccagaggtgtacgtccatcaaggtaactg 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctggatgagctggaggtgaaacttggacatccagaggtgtacgtccatcaaggtaactg 600
Query: 1610 tgagcatctgttcacgttctcggagatccgactcctcaacccgaccgatccccagaagtt 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgagcatctgttcacgttctcggagatccgactcctcaacccgaccgatccccagaagtt 660
Query: 1670 agtatactacccgtactccacggccgtgtctcagaaccagaccatatactgtaccacgtg 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtatactacccgtactccacggccgtgtctcagaaccagaccatatactgtaccacgtg 720
Query: 1730 cgctgaatttggcgccaaatggatagtgaccggctgtgagaaggtgcccttcgacccggc 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgctgaatttggcgccaaatggatagtgaccggctgtgagaaggtgcccttcgacccggc 780
Query: 1790 gttcttctgtgatacttgtttgaaaatata 1819
||||||||||||||||||||||||||||||
Sbjct: 781 gttcttctgtgatacttgtttgaaaatata 810
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,229
Number of extensions: 6141
Number of successful extensions: 6141
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6141
Number of HSP's successfully gapped: 1
Length of query: 2413
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2396
Effective length of database: 8,119,229
Effective search space: 19453672684
Effective search space used: 19453672684
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)