BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08903 (UTR included)
(1945 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 101 4e-21
BF14_335_C2 82 4e-15
BF14_335_C4 72 4e-12
BF01049B1F01 70 1e-11
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 4e-21
Identities = 100/114 (87%), Gaps = 3/114 (2%)
Strand = Plus / Plus
Query: 1833 agatgaaacctctgagcatcccatggattcaccgtg--ggtgccgcatccatcgtctt-c 1889
||||||||||||| ||||| | |||||||||||||| ||||||| ||||||| || |
Sbjct: 365 agatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgc 424
Query: 1890 agggagaggagcgtcaacagtgcgtgggatttgcgacccaggtgtacgtttaag 1943
|||||||||||| |||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 425 agggagaggagcttcaacagtgcctgggagttgcgacccaggtgtaggtttaag 478
>BF14_335_C2
Length = 1827
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1889 cagggagaggagcgtcaacagtgcgtgggatttgcgacccaggtgtacgtttaagag 1945
||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcgacacaggtgtaggtttaagag 924
>BF14_335_C4
Length = 1491
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1892 ggagaggagcgtcaacagtgcgtgggatttgcgacccaggtgtacgtttaag 1943
|||||||||| |||||||||| ||||| |||||||||||||||| |||||||
Sbjct: 1302 ggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaag 1251
>BF01049B1F01
Length = 840
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1889 cagggagaggagcgtcaacagtgcgtgggatttgcgacccaggtgta 1935
||||||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 592 cagggagaggagcttcaacagtgcctgggacttgcgacccaggtgta 638
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,713
Number of extensions: 5935
Number of successful extensions: 5935
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5934
Number of HSP's successfully gapped: 4
Length of query: 1945
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1928
Effective length of database: 8,119,229
Effective search space: 15653873512
Effective search space used: 15653873512
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)