BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08911 (UTR included)
(1939 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A1A09 325 2e-88
>BF01061A1A09
Length = 586
Score = 325 bits (164), Expect = 2e-88
Identities = 179/184 (97%)
Strand = Plus / Plus
Query: 1036 gcggtcgcagcgacggtcgacttcaagaagaccattccaaaactcttcagatagcgctac 1095
|||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||
Sbjct: 60 gcggtcgcagcgacggtcgacttcaagaagaccattccgaagctcttcagatagcactac 119
Query: 1096 cgctacaccagctttacctgaaggcgacccagtgtatatcagccggtaaccctgtccgat 1155
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cgctacaccagctttacctgatggcgacccagtgtatatcagccggtaaccctgtccgat 179
Query: 1156 gttccgagacttattgcccttccagcgagtttcctggaggaacgcacactggacccgacg 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 180 gttccgagacttattgcccttccagcgagtttcctggaggaacgcacactggacctgacg 239
Query: 1216 tctc 1219
||||
Sbjct: 240 tctc 243
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1219 cccgttttatgggtaaaaccaggaaaggaaaagatagaggacgggggatagaggttggga 1278
||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||
Sbjct: 511 cccgttttatgggtaaaaccaggaaaggaaaagatagagaaggggggaaagaggttaggg 570
Query: 1279 aggggaatgggggga 1293
||||||||| |||||
Sbjct: 571 aggggaatgagggga 585
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,480
Number of extensions: 4449
Number of successful extensions: 4449
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4449
Number of HSP's successfully gapped: 2
Length of query: 1939
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1922
Effective length of database: 8,119,229
Effective search space: 15605158138
Effective search space used: 15605158138
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)