BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08914 (UTR included)
(1750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 92 4e-18
BF14_335_C2 82 3e-15
BF01031B2E06 68 5e-11
>BF01047B2H03
Length = 758
Score = 91.7 bits (46), Expect = 4e-18
Identities = 288/362 (79%), Gaps = 5/362 (1%)
Strand = Plus / Minus
Query: 1141 aactagctatatctgcggggaggcagttgaaactgcaaagtatttgctggtgggatgaag 1200
|||| |||||||||||| ||||||||||| || ||| || |||||||| ||||||| ||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 1201 ggtactcctggatagcgggcaatac-cctcatcgttacgataggtttctagaaatcatac 1259
| |||||||||||||||| |||||| | || | |||||| || || | ||||||
Sbjct: 305 gctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcatac 246
Query: 1260 gtaaagcgatttgtctttcggtagccagagcgcaaaaagaaataatcacaagcgagcgat 1319
| ||||| || || ||| ||||| || ||| |||||||||||| ||||| || |||||
Sbjct: 245 atgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgat 186
Query: 1320 caataggttttgtgagagaaagcactaaggccttaaaaattaaacgtcaagccttattct 1379
||| ||||||||||||||| || | ||| || ||| | |||| |||||||||| |||
Sbjct: 185 taattggttttgtgagagaagaca-ttagggctataaagtcaaacatcaagccttactct 127
Query: 1380 atcctataagcggctttggattggaatataatgatagatacgtatgggaagcaatatcaa 1439
||||| |||||| || |||||| | |||||| || |||||||||||| | | ||| |||
Sbjct: 126 atccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgata-caa 68
Query: 1440 aatcgcagagaatatttgtgtgccttcgtccagtccagacatatttt-tatattcgcgaa 1498
|||| | ||| ||| ||||||| | ||||| ||||||||||||| ||||||||||||
Sbjct: 67 aatccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaa 9
Query: 1499 tt 1500
||
Sbjct: 8 tt 7
>BF14_335_C2
Length = 1827
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 1516 taatagagcttgcggttccttgggaaaccaacatccccagagaccatgccatcaacgtta 1575
||||||||| | ||||||||||| | ||||||||||||| | ||||||||||||| || |
Sbjct: 1238 taatagagcctacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtca 1179
Query: 1576 acatgtattacgagctcacta 1596
||| |||||| ||||||||||
Sbjct: 1178 acaagtattatgagctcacta 1158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 1683 aacatcagttcattcctggaacgtacgtcgaaggcagtcctagtaagttcgtttcaaatt 1742
|||| |||||||||| | |||||||| |||||| ||| |||||| ||||||||||||||
Sbjct: 1046 aacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatt 987
Query: 1743 tggttagg 1750
||||||||
Sbjct: 986 tggttagg 979
>BF01031B2E06
Length = 707
Score = 67.9 bits (34), Expect = 5e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1602 ctcactaagaataggttcgtgt-aaatttgtacgcgatagaagtgggcccgagaggtata 1660
||||||||||||||||||||| ||||||||||||| |||||||||| |||| | | ||
Sbjct: 488 ctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgta 547
Query: 1661 agagcgaaatctctctacaacc 1682
| ||| ||||||||| ||||||
Sbjct: 548 aaagctaaatctctccacaacc 569
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,363
Number of extensions: 2899
Number of successful extensions: 2899
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2898
Number of HSP's successfully gapped: 4
Length of query: 1750
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1733
Effective length of database: 8,119,229
Effective search space: 14070623857
Effective search space used: 14070623857
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)