BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08943 (UTR included)
(1345 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_871_C1 1639 0.0
>BF14_871_C1
Length = 942
Score = 1639 bits (827), Expect = 0.0
Identities = 853/861 (99%), Gaps = 3/861 (0%)
Strand = Plus / Plus
Query: 488 ggatgtctttcttatgattaggcgaaaaaaacttaccatctttacggatgccaaagatac 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ggatgtctttcttatgattaggcgaaaaaaacttaccatctttacggatgccaaagatac 132
Query: 548 aacaactgttttggaattgaagaaaatgatagagggcatcttgaaagtagctcctccgag 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aacaactgttttggaattgaagaaaatgatagagggcatcttgaaagtagctcctccgag 192
Query: 608 tcaaatgctttttaacaaggatagccagctcatggacgatgacaaaactctggcagagta 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcaaatgctttttaacaaggatagccagctcatggacgatgacaaaactctggcagagta 252
Query: 668 cggtcttacttcagccactgccaaagctcaatgcccggcaccaattggacttgctttaag 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cggtcttacttcagccactgccaaagctcaatgcccggcaccaattggacttgctttaag 312
Query: 728 aaaagagaatggtgaatttgaggctctagaactgactccgtactcgtctcccccggacct 787
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 313 aaaagagaacggtgaatttgaggctctagaactgactccatactcgtctcccccggacct 372
Query: 788 gcctgatgttatgaaatcccaggagacaaatggacaggaacagatggatcaacactaaac 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcctgatgttatgaaatcccaggagacaaatggacaggaacagatggatcaacactaaac 432
Query: 848 aactcggcagccaacatggtaacatcagctcagtgtcggaatgattttcatacatttgtt 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aactcggcagccaacatggtaacatcagctcagtgtcggaatgattttcatacatttgtt 492
Query: 908 ttgaacgcgccgctaacggacggcgactttactacttttgcatatgaacatgtttcttt- 966
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttgaacgcgccgctaacggacggcgactttactacttttgcatatgaacatgtttcttta 552
Query: 967 --aaaaaaaaaacgattaattctaattaacagctaggttataaacaaattgtatggaggg 1024
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 553 aaaaaaaaaaaacgattaattctaaataacagctaggttataaacaaattgtatggaggg 612
Query: 1025 tgtctaagttgtggacctatcgagttacacggtctgtttaatttaacttctttctttaat 1084
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgtctaagttgtggacctatcaagttacacggtctgtttaatttaacttctttctttaat 672
Query: 1085 ccctccgtccgcattatattaatttttatgacgcttcacactaatggtttttttgtagtt 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ccctccgtccgcattatattaatttttatgacgcttcacactaatggtttttttgtagtt 732
Query: 1145 tggtctacatggaatgcaggtatatttaattctagtgtctttcagacttaaccgggcagg 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tggtctacatggaatgcaggtatatttaattctagtgtctttcagacttaaccgggcagg 792
Query: 1205 caactggctgctagtggcagagtacagtgaaatataatgttaaagatggcaacactgtca 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 caactggctgctagtggcagagtacagtgaaatataatgttaaagatggcaacactgtca 852
Query: 1265 gtagtgagagctagtgtcgtgatacttgtatttattacaacagattgttgtgattcgtct 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 853 gtagtgagagctagtgtcgtgatacttgtatttattacaacagattgttgtgatttgtct 912
Query: 1325 ctgtaataggttatgtcactt 1345
|||||||||||||||||||||
Sbjct: 913 ctgtaataggttatgtcactt 933
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 304 tacgcctttaagcgtttttttgtataaattaactaatagtttatagttttttttaattat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tacgcctttaagcgtttttttgtataaattaactaatagtttatagttttttttaattat 61
Query: 364 aatatcaaaatgg 376
|||||||||||||
Sbjct: 62 aatatcaaaatgg 74
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,145
Number of extensions: 5360
Number of successful extensions: 5360
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5359
Number of HSP's successfully gapped: 2
Length of query: 1345
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1328
Effective length of database: 8,119,229
Effective search space: 10782336112
Effective search space used: 10782336112
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)