BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08944 (UTR included)
(2425 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1H12 420 e-117
>BF01027A1H12
Length = 787
Score = 420 bits (212), Expect = e-117
Identities = 218/220 (99%)
Strand = Plus / Plus
Query: 2206 gtgaaaatgttaaggctgatttggatggcgaagcgatcccgactgctgatgtttagaacg 2265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gtgaaaatgttaaggctgatttggatggcgaagcgatcccgactgctgatgtttagaacg 235
Query: 2266 atttacttttatacaatatacaaaaccgtaatgtcgatagattaggttatacgatgaact 2325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atttacttttatacaatatacaaaaccgtaatgtcgatagattaggttatacgatgaact 295
Query: 2326 gacgctcggcgccaaggctcgctggccgccgacgttggcgaccgtggatatgtatggagc 2385
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 296 gacgctcggcgccaaggctcgctggccgccgacgttggcgaccgtggatatgtagggagc 355
Query: 2386 gctatttgataacggacttaggattacacatgtttattat 2425
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 356 gctattcgataacggacttaggattacacatgtttattat 395
Score = 347 bits (175), Expect = 5e-95
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1750 agaagttcaggagcgttcagagaggattgttaccggacagcgtggccgcagcacccatca 1809
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaagttcacgagcgttcagagaggattgttaccggacagcgtggccgcagcacccatca 60
Query: 1810 agaatatggagatatacaagaagatactgtacgagaagatagagaaggactcggccgagg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatatggagatatacaagaagatactgtacgagaagatagagaaggactcggccgagg 120
Query: 1870 tcatacagaaccccaagatgcattggaggaggaagatggaacaggatagcaattagtga 1928
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcatacagaaccccaagatgcattggaggaggaagatggaacaggatagcaattagtga 179
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,126
Number of extensions: 5626
Number of successful extensions: 5626
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5626
Number of HSP's successfully gapped: 2
Length of query: 2425
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2408
Effective length of database: 8,119,229
Effective search space: 19551103432
Effective search space used: 19551103432
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)