BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08976 (UTR included)
(1256 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 190 4e-48
BF01043B1E03 182 9e-46
BF01017A1F03 113 7e-25
BF01031B2E06 109 1e-23
BF01047B2H03 105 2e-22
BF14_335_C4 96 2e-19
BF01055B2A04 94 6e-19
BF01016B1E06 94 6e-19
BF01044B2F11 74 6e-13
BF14_335_C5 72 2e-12
BF01037A2H12 70 9e-12
BF01021A2B11 70 9e-12
>BF14_335_C2
Length = 1827
Score = 190 bits (96), Expect = 4e-48
Identities = 283/346 (81%), Gaps = 22/346 (6%)
Strand = Plus / Minus
Query: 401 acatatttttatattcgcgaattctaaaacgcgttgtgagaatagagcctacggttcctt 460
|||||||| | |||||||||||| |||| |||| | | ||||||||||||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 461 gggaaaccaacatctccaaagaccatgccatcaaggtcaataaatattacaagctcacaa 520
|| | ||||||||| ||||| ||||||||||||||||||| || ||||| |||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcac-- 1160
Query: 521 acgctattgctagaaataggttcgtcgttga-tttatacgcggtagaagtgggagc---- 575
||| ||||||||||| | | ||| |||| ||||||||||||||
Sbjct: 1159 ----------taggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 576 --gagaggtataacggctaaatctctctacaacctactaaaagacttgggcctgtccagg 633
|||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 634 actcacatcaattcattcttggaacgtacttcgaaggcagacctggtaggtttttttcaa 693
||| ||| || ||||||||| ||||||||||||||| ||| || ||||||| ||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 694 atttggttaggtagagagaggagcttggacagtggaggcgagcgtt 739
|||||||||| ||||||||||||||||| ||||||| |||||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggaggtgagcgtt 947
>BF01043B1E03
Length = 830
Score = 182 bits (92), Expect = 9e-46
Identities = 169/194 (87%), Gaps = 3/194 (1%)
Strand = Plus / Plus
Query: 569 tgggagcgagaggtataacggctaaatctctctacaacctactaaaagacttgggcctgt 628
|||||| | |||||||||| ||| |||||||||||||||||| ||| ||||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 629 ccaggactcacatcaattcattcttggaacgtacttcgaaggcagacctggtaggttttt 688
|||| ||| ||||||| |||||||||||||||||| | ||||||| ||| |||||| |
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcct---aggtttgt 320
Query: 689 ttcaaatttggttaggtagagagaggagcttggacagtggaggcgagcgtttaacacgca 748
||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcg 380
Query: 749 ttagataggggccc 762
||||||||||||||
Sbjct: 381 ttagataggggccc 394
>BF01017A1F03
Length = 782
Score = 113 bits (57), Expect = 7e-25
Identities = 168/204 (82%), Gaps = 2/204 (0%)
Strand = Plus / Plus
Query: 556 tacgcggtagaagtgggagcgagaggtataacggctaaatctctctacaacctactaaaa 615
||||||||||||| ||||||||||| ||||||||||||||||||| | | |
Sbjct: 57 tacgcggtagaagcgggagcgagagatataacggctaaatctctcgtttagtaggttgta 116
Query: 616 gacttgggcctgtccaggactcacatcaattcattcttggaacgtacttcgaaggc--ag 673
|||||| ||| ||||| ||| |||||||||||||||||||||||||||| ||||| ||
Sbjct: 117 gacttgagccagtccaaaactaacatcaattcattcttggaacgtacttccaaggcgcag 176
Query: 674 acctggtaggtttttttcaaatttggttaggtagagagaggagcttggacagtggaggcg 733
||| ||| || |||| || |||||||| ||||||||||||||| || ||||||| |
Sbjct: 177 ccctagtacattagtttctaagttggttagatagagagaggagcttccacggtggaggtg 236
Query: 734 agcgtttaacacgcattagatagg 757
|||||||||| |||||||||||||
Sbjct: 237 agcgtttaacgcgcattagatagg 260
>BF01031B2E06
Length = 707
Score = 109 bits (55), Expect = 1e-23
Identities = 172/212 (81%), Gaps = 13/212 (6%)
Strand = Plus / Plus
Query: 463 gaaaccaacatctccaaagaccatgccatcaaggtcaataaatattac-aagctcacaaa 521
|||||||||||| |||||||||||||||||||| ||||||| |||||| |||||||| ||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 522 cgctattgctagaaataggttcgtcgttgatttatacgcggtagaagtgggagcgagagg 581
||||||||||| | |||| ||||||||||||||||||||||| |
Sbjct: 496 g------------aataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgt 543
Query: 582 tataacggctaaatctctctacaacctactaaaagacttgggcctgtccaggactcacat 641
| ||| |||||||||||| |||||||||||||| ||||||||||||||| || ||||
Sbjct: 544 tgtaaaagctaaatctctccacaacctactaaaaaccttgggcctgtccagatctaacat 603
Query: 642 caattcattcttggaacgtacttcgaaggcag 673
||| | || || |||| ||||||||||||||
Sbjct: 604 caaataatctttagaacatacttcgaaggcag 635
>BF01047B2H03
Length = 758
Score = 105 bits (53), Expect = 2e-22
Identities = 112/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Minus
Query: 301 tctatcattaaagcggcttcggattggactataatgatggatacgcatgagaaacaatac 360
|||||| ||||||||| ||||||||| |||||||| ||||||||| ||| | ||| ||||
Sbjct: 129 tctatccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgatac 70
Query: 361 aatatcccagaggatatttgtgcgtcggcctccagaccagacatatttt-tatattcgcg 419
|| ||||| ||| ||||| ||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 69 aaaatccccgagcatatt-gtgtgtcggtttccagaccagacatattttatatattcgcg 11
Query: 420 aattctaaa 428
|||| ||||
Sbjct: 10 aattttaaa 2
>BF14_335_C4
Length = 1491
Score = 95.6 bits (48), Expect = 2e-19
Identities = 103/122 (84%), Gaps = 7/122 (5%)
Strand = Plus / Plus
Query: 689 ttcaaatttggttaggtagagagaggagcttggacagtggaggcgagcgtttaacacgca 748
|||| ||||||||||||||||||||||||||||| ||| |||| |||||||||| |||
Sbjct: 1177 ttcatatttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcg 1236
Query: 749 ttagataggggcccctt-------cacctgggtcgcaagtcccacgcaccgttgaagctc 801
| ||||| |||||||| |||||||||||||||||||| |||| ||||||||||
Sbjct: 1237 taagataaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctc 1296
Query: 802 ct 803
||
Sbjct: 1297 ct 1298
>BF01055B2A04
Length = 830
Score = 93.7 bits (47), Expect = 6e-19
Identities = 87/98 (88%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 573 agcgagaggtataacggctaaatctctctacaacctactaaaagacttgggcctgtccag 632
||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 420 agcgaaaggtataacagctaaatctct--acaacctactaaaagacttgggcctgttaaa 363
Query: 633 gactcacatcaattcattcttggaacgtacttcgaagg 670
|| ||| |||||| ||||||| ||||||||||||||||
Sbjct: 362 ga-tcaaatcaatccattcttagaacgtacttcgaagg 326
>BF01016B1E06
Length = 606
Score = 93.7 bits (47), Expect = 6e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 685 ttttttcaaatttggttaggtagagagaggagcttggacagtggaggcgagcgtttaac 743
|||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||
Sbjct: 326 ttttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaac 268
>BF01044B2F11
Length = 728
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/64 (90%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 698 ggttaggtagagagaggagcttggacagtggaggcgagcgtttaacacgcattagatagg 757
|||||| ||||||||||||||||||||||||||| ||||||||| || || ||||||||
Sbjct: 586 ggttagatagagagaggagcttggacagtggaggtgagcgtttatca--cagtagatagg 643
Query: 758 ggcc 761
||||
Sbjct: 644 ggcc 647
>BF14_335_C5
Length = 1597
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 702 aggtagagagaggagcttggacagtggaggcgagcgtttaacacgcattagataggggcc 761
|||||||||||||||||||||| ||||||| |||||||||| ||| ||||| ||||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 762 cctt 765
||||
Sbjct: 1498 cctt 1501
>BF01037A2H12
Length = 773
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 551 atttatacgcggtagaagtgggagcgagaggtataacggctaaatctctctacaacctac 610
|||| |||| |||| |||| |||||||||||||||| || ||||||||| ||||||| |
Sbjct: 672 atttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctgc 731
Query: 611 taaaagacttg 621
|||||||||||
Sbjct: 732 taaaagacttg 742
>BF01021A2B11
Length = 729
Score = 69.9 bits (35), Expect = 9e-12
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 690 tcaaatttggttaggtagagagaggagcttggacagtggaggcgagcgtttaacacgcat 749
||||||||||||||| |||| |||||||||||| ||||||| ||||||||||| || |
Sbjct: 357 tcaaatttggttaggaagag--aggagcttggacggtggaggtgagcgtttaacgcgtgt 414
Query: 750 tagataggggccccttca 767
||||| ||||| ||||||
Sbjct: 415 tagatcggggcgccttca 432
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 172,274
Number of extensions: 3973
Number of successful extensions: 3973
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 3964
Number of HSP's successfully gapped: 15
Length of query: 1256
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1239
Effective length of database: 8,119,229
Effective search space: 10059724731
Effective search space used: 10059724731
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)