BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09018 (UTR included)
(1585 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3475_C1 1669 0.0
>BF14_3475_C1
Length = 862
Score = 1669 bits (842), Expect = 0.0
Identities = 857/862 (99%)
Strand = Plus / Plus
Query: 382 ataatagaattggtaaatatatataaataataaatatctaattgaagtgaaaataaaagt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataatagaattggtaaatatatataaataataaatatctaattgaagtgaaaataaaagt 60
Query: 442 gtcgtatgtagttagaaatgaaataaatacagttttactaccttagtcaactgatctaca 501
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 gtcgtatgtagttagaaatgaaataaatacagttttactaccttactcaactgatctaca 120
Query: 502 tgagtttagatttagaagaagctaacgaaacacaacaactgatgcaaaatgaaggagaag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagtttagatttagaagaagctaacgaaacacaacaactgatgcaaaatgaaggagaag 180
Query: 562 aggaagaacaaaaagttcaaccctcaacttcaccagttacaagtaataagatgtcaagtg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggaagaacaaaaagttcaaccctcaacttcaccagttacaagtaataagatgtcaagtg 240
Query: 622 gagccgcgagtctcacatcgaaaaaccctcaaaacatcactagtgcaggaaacagtagcg 681
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gagccgcgagtctcacatcgaaaaaccctcaaaacatcactagtgcaggcaacagtagcg 300
Query: 682 taaatgattctacaaaattgtcctatgttaacgaaaagagattacatcgcgactttatgc 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taaatgattctacaaaattgtcctatgttaacgaaaagagattacatcgcgactttatgc 360
Query: 742 ggacaaatacaaaaccaaaacacattccaaaagaaacgccagatgtgaagcatatggaga 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggacaaatacaaaaccaaaacacattccaaaagaaacgccagatgtgaagcatatggaga 420
Query: 802 aagctcttctagaattacttgacgattttcatacagggaagctgagtgcttttggtaccg 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagctcttctagaattacttgacgattttcatacagggaagctgagtgcttttggtaccg 480
Query: 862 ggtgtagcatggagcagatgatcaatataagagaccagcaagagaatttggcacggcttc 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtgtagcatggagcagatgatcaatataagagaccagcaagagaatttggcacggcttc 540
Query: 922 atttcagtttgtatggtgatgctgagaagcctactgaagacagttttgaaaatagttcta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atttcagtttgtatggtgatgctgagaagcctactgaagacagttttgaaaatagttcta 600
Query: 982 atgataaaatgggtcaactggtgcaaagtttggagcaattgtcagcatccattgagctac 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgataaaatgggtcaactggtgcaaagtttggagcaattgtcagcatccattgagctac 660
Query: 1042 tccaatctaatggggcaggaaattcaagtagtagcaaagaataaatttatttttatattt 1101
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tccaatctaatggagcaggaaattcaagtagtagcaaagaataaatttatttttatattt 720
Query: 1102 tttatgtggtgtatgtaaaaggtttctaattatttatgttgatttgaacacaaatgttaa 1161
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tttatgtggtgtatgtaaatggtttctaattatttatgttgatttgaacacaaatgttaa 780
Query: 1162 atttgatatatatatattgtgtgatatttggaagaattccagcaacagatattttattgt 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atttgatatatatatattgtgtgatatttggaagaattccagcaacagatattttattgt 840
Query: 1222 ataccaaacttctttgtttttg 1243
|||||||||||||| |||||||
Sbjct: 841 ataccaaacttcttcgtttttg 862
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,398
Number of extensions: 11482
Number of successful extensions: 11482
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11482
Number of HSP's successfully gapped: 1
Length of query: 1585
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1568
Effective length of database: 8,119,229
Effective search space: 12730951072
Effective search space used: 12730951072
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)