BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09042 (UTR included)
(2764 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B2E12 1166 0.0
>BF01011B2E12
Length = 625
Score = 1166 bits (588), Expect = 0.0
Identities = 611/616 (99%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 857 taaaactttaaggggtcacatggaggatgttctggacatcagttggagtagttcatcact 916
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 10 taaaactttaaggggtcacatggaggatgttctggacatcatttggagtagttcctcact 69
Query: 917 acatt-tggcatccg-gctcagtagacaacaagctgattgtctgggatgtggcgagagct 974
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acattctggcatccgcgctcagtagacaacaagctgattgtctgggatgtggcgagagct 129
Query: 975 cgatctagtggtattgtctctgatcataaaggctttgtccagggagtagcatgggaccct 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cgatctagtggtattgtctctgatcataaaggctttgtccagggagtagcatgggaccct 189
Query: 1035 caaggacagctgatagccacagctagctcggatagagttttccgaacatttgatgtgggg 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 caaggacagctgatagccacagctagctcggatagagttttccgaacatttgatgtgggg 249
Query: 1095 actaagaaagtgttgtctcgtagcagtaaggctattctaccgttccctaaggagcatacc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actaagaaagtgttgtctcgtagcagtaaggctattctaccgttccctaaggagcatacc 309
Query: 1155 ctacatgaagtgaaggtccgcctctaccatgacgacactctacagacgtactacaggaga 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctacatgaagtgaaggtccgcctctaccatgacgacactctacagacgtactacaggaga 369
Query: 1215 ttacatttcagtcccgatggaatgttcattgctgtgccggccggaagaatagaaccagaa 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttacatttcagtcccgatggaatgttcattgctgtgccggccggaagaatagaaccagaa 429
Query: 1275 caaggcaaactggacattaaaccaatgaatgctgtttacatttacactagacactctctc 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caaggcaaactggacattaaaccaatgaatgctgtttacatttacactagacactctctc 489
Query: 1335 aaaactcctgcgtgtgtggttccgtgtggagagccggcgctggtgtgccgctggtcgccc 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaaactcctgcgtgtgtggttccgtgtggagagccggcgctggtgtgccgctggtcgccc 549
Query: 1395 gtgcgtcgtgcggcgcggacttcgccccccgcgccgtctgctttgcagcacgcccctcgg 1454
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtgcgtcgtgcggagcggacttcgccccccgcgccgtctgctttgcagcacgcccctcgg 609
Query: 1455 cttctgctggcggtgg 1470
||||||||||||||||
Sbjct: 610 cttctgctggcggtgg 625
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,984
Number of extensions: 7331
Number of successful extensions: 7331
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7330
Number of HSP's successfully gapped: 1
Length of query: 2764
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2747
Effective length of database: 8,119,229
Effective search space: 22303522063
Effective search space used: 22303522063
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)