BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09048 (UTR included)
(1552 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1784_C1 1398 0.0
>BF14_1784_C1
Length = 829
Score = 1398 bits (705), Expect = 0.0
Identities = 717/721 (99%)
Strand = Plus / Plus
Query: 297 gcgagcggcgcgcgatgccgcacagctatgagtcctccgagcttcgccatccgagacctt 356
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgagcggtgcgcgatgccgcacagctatgagtcctccgagcttcgccatccgagacctt 60
Query: 357 ctgccggaggcgtcgtcgcggtccccctcgccctccgacacggagctggatgtcaccggt 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgccggaggcgtcgtcgcggtccccctcgccctccgacacggagctggatgtcaccggc 120
Query: 417 acggagacgccgccgccaggctgctccaccaccgatgaaaagaaaaatgaaaaaccggcc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acggagacgccgccgccaggctgctccaccaccgatgaaaagaaaaatgaaaaaccggcc 180
Query: 477 tacagctacaatgcgctcatcatgatggccatacgcagcagtcccgagagacggctcacg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacagctacaatgcgctcatcatgatggccatacgcagcagtcccgagagacggctcacg 240
Query: 537 ctcaacggcatctatgagtacatcatgaagaacttcccctactacaaggagaacaagcag 596
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ctcaacggcatctatgagtacatcatgaagaacttcccatactacaaggagaacaagcag 300
Query: 597 ggctggcagaactctattcgacacaatctgagtttgaataagtgtttcgtgaaagtcccg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctggcagaactctattcgacacaatctgagtttgaataagtgtttcgtgaaagtcccg 360
Query: 657 cgtcactacgacgatcccgggaaagggaactactggatgctggacccttcgtctgacgac 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtcactacgacgatcccgggaaagggaactactggatgctggacccttcgtctgacgac 420
Query: 717 gtcttcatcggtggcaccactggcaagctgaggaggagatccaccgccgcatctaggtct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcttcatcggtggcaccactggcaagctgaggaggagatccaccgccgcatctaggtct 480
Query: 777 cggctcgcagccttcaagagaggtgccgtcctccaccccatgttcgggaatccgtatgcg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggctcgcagccttcaagagaggtgccgtcctccaccccatgttcgggaatccgtatgcg 540
Query: 837 tctctggtgggtctgtacccacccttactatcggtgtacgggaggtacgccctgccgagc 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctctggtgggtctgtacccacccttactatcggtgtacgggaggtacgccctgccgagc 600
Query: 897 ccgctgctgaggttgccgccgcctcctcccagtccctatcaccagctgtatcgcaggatc 956
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 601 ccgctgctgaggttgccgccgcctcctcccagcccctatcaccagctgtatcgcaggatc 660
Query: 957 cacggcctgtcacctcccggcagcccaccagcggagccggagtcacatctgatgaagcac 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cacggcctgtcacctcccggcagcccaccagcggagccggagtcacatctgatgaagcac 720
Query: 1017 a 1017
|
Sbjct: 721 a 721
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 131,117
Number of extensions: 2150
Number of successful extensions: 2150
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2150
Number of HSP's successfully gapped: 1
Length of query: 1552
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1535
Effective length of database: 8,119,229
Effective search space: 12463016515
Effective search space used: 12463016515
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)