BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09055 (UTR included)
(2920 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3068_C1 2462 0.0
>BF14_3068_C1
Length = 1329
Score = 2462 bits (1242), Expect = 0.0
Identities = 1305/1330 (98%), Gaps = 22/1330 (1%)
Strand = Plus / Plus
Query: 875 ggatgtgagcgaggcgggtccgcggcgcgtgctcgtgtttgcgagtcacactcgctccgt 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgtgagcgaggcgggtccgcggcgcgtgctcgtgtttgcgagtcacactcgctccgt 60
Query: 935 taagacggcagccttccgtccgagcgagccgtgcgtgttcgcaaccggggcgcgggacgg 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagacggcagccttccgtccgagcgagccgtgcgtgttcgcaaccggggcgcgggacgg 120
Query: 995 acgcgtgctgctca---------------------cccccgccgccgccgtgctgcgacc 1033
||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 acgcgtgctgctctgggacgtgcgagccgcccccgcccccgccgccgccgtgctgcgacc 180
Query: 1034 cgacgacgtgctggccgccgtgcacgccgccccgtcccctcgccaccgccggcctcgtcc 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgacgacgtgctggccgccgtgcacgccgccccgtcccctcgccaccgccggcctcgtcc 240
Query: 1094 cgagcgcgccgccagcgtcactggcctcgctttccgcgacgaccgcacgctcgtctcctg 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgagcgcgccgccagcgtcactggcctcgctttccgcgacgaccgcacgctcgtctcctg 300
Query: 1154 cggcgagtgcgatggcaatattaaggtctgggacctccgcaagagctacggcgcctaccg 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggcgagtgcgatggcaatattaaggtctgggacctccgcaagagctacggcgcctaccg 360
Query: 1214 acgcgagccgctacccatgcactccatcccctactgcgggagctcagcgcgcaacggata 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acgcgagccgctacccatgcactccatcccctactgcgggagctcagcgcgcaacggata 420
Query: 1274 cacgaacttgatcgtagacgaggccggcgtgcggctgtacgcgagctgcatggacgacgt 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacgaacttgatcgtagacgaggccggcgtgcggctgtacgcgagctgcatggacgacgt 480
Query: 1334 catctactgcttcaacgtgtccacgttcaacgcgctgccggagcgccgctacgtcggaca 1393
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 catctactgcttcaacgtgtccacgttcaacgcgctgccggaacgccgctacgtcggaca 540
Query: 1394 cgagaacagcaccttctacatcaaaacgggtctctcccccgacggccgctacctcgtgag 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgagaacagcaccttctacatcaaaacgggtctctcccccgacggccgctacctcgtgag 600
Query: 1454 cggctccagcgacaagcacgcctacgtgtggaacgtacgtcgatcccagccggtggcgcg 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggctccagcgacaagcacgcctacgtgtggaacgtacgtcgatcccagccggtggcgcg 660
Query: 1514 gcttgcgggccaccgcgccgaggtgacctgcgccgcctgggggcgcgcgcccgactgccg 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcttgcgggccaccgcgccgaggtgacctgcgccgcctgggggcgcgcgcccgactgccg 720
Query: 1574 gctcgtcacctgcagcgacgacgcccgccacatgatctggcgggtcggccgcgaggagcg 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctcgtcacctgcagcgacgacgcccgccacatgatctggcgggtcggccgcgaggagcg 780
Query: 1634 ccacgacggagacgactgcgccggccgagccgagcgaccgcccagcgaccagcaggacgc 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccacgacggagacgactgcgccggccgagccgagcgaccgcccagcgaccagcaggacgc 840
Query: 1694 gccgctgtggggagcgctggagaggacgcctgcatctttgaggagagccccggcggcgcc 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccgctgtggggagcgctggagaggacgcctgcatctttgaggagagccccggcggcgcc 900
Query: 1754 cggctcggccggtgcggaccgcgttcgacacaaggcgtccaagcgctgtctggccgagct 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cggctcggccggtgcggaccgcgttcgacacaaggcgtccaagcgctgtctggccgagct 960
Query: 1814 catgggcgctgcgcgggaacgagacgaagacggtgccggcaagaggccgcggaccgaaga 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 catgggcgctgcgcgggaacgagacgaagacggtgccggcaagaggccgcggaccgaaga 1020
Query: 1874 accgcgaaccgtggacctgaagaggcgggcggagtgtggcgaggatggtccgccttccaa 1933
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1021 accgcgaaccgtggacctgaagaggcgggcggactgtggcgaggatggtccgccttccaa 1080
Query: 1934 gaaggaacgtgcggagtccgaagcgccgcccgcggactgggcatacttctcccctaaggc 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gaaggaacgtgcggagtccgaagcgccgcccgcggactgggcatacttctcccctaaggc 1140
Query: 1994 gggttcgtccttcatgacaccgactaaaaactacgacaagagaacttgtaagactctctc 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gggttcgtccttcatgacaccgactaaaaactacgacaagagaacttgtaagactctctc 1200
Query: 2054 cccgaagagtcccaactctgcgtctcctccccaggtgttgttgaagactcccagcaagga 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cccgaagagtcccaactctgcgtctcctccccaggtgttgttgaagactcccagcaagga 1260
Query: 2114 ttcacctcacaaactcagaatcgtcagtttctcgactcccaccaaaaacttacccgactt 2173
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1261 ttcacctcacaaactcagaatcgtcagtttctcgactcccacc-aaaacttacccgactt 1319
Query: 2174 cgtgatggac 2183
||||||||||
Sbjct: 1320 cgtgatggac 1329
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,493
Number of extensions: 5562
Number of successful extensions: 5562
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5561
Number of HSP's successfully gapped: 2
Length of query: 2920
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2902
Effective length of database: 8,109,745
Effective search space: 23534479990
Effective search space used: 23534479990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)