BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09063 (UTR included)
(2470 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1E10 1356 0.0
>BF01043A1E10
Length = 762
Score = 1356 bits (684), Expect = 0.0
Identities = 717/729 (98%)
Strand = Plus / Plus
Query: 1056 tgggttgaaccggaggatgttaaagaggaatttaaccagttagtggaatatagtaacaac 1115
||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 tgggtggagccggaagatgttaaagaggaatttaaccagttagtggaatatagtaacaac 93
Query: 1116 ataagcagatgtgttctgtgcaccaaagtacaagagctggatagtaaaatctgtaaacat 1175
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 94 ataagcagatgtgttctgtgcaccaaagtccaagagctggatagtaaaatctgtaaacat 153
Query: 1176 tcatcttataactttatgaagagatacattcttagactgaagcatttactttttgtgaaa 1235
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 154 tcatcttataattttatgaagagatacattcttaggctgaagcatttactttttgtgaaa 213
Query: 1236 gagactatgagaccgttcggattagtcatggcgtatttctttttttacaccatgagtggt 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gagactatgagaccgttcggattagtcatggcgtatttctttttttacaccatgagtggt 273
Query: 1296 ctcttgcctgttagacctaacatggtgaacgtgtgcaaggctctgggtatgaaatttgac 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctcttgcctgttagacctaacatggtgaacgtgtgcaaggctctgggtatgaaatttgac 333
Query: 1356 tccaaagcaattgtggtcagcgtcgcattggtatatattgtgatgaatatcgtatcagct 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tccaaagcaattgtggtcagcgtcgcattggtatatattgtgatgaatatcgtatcagct 393
Query: 1416 gtcgtagttaagatatttgggaagcgtaaattgatcttatcatcactcttcgcttcagct 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtcgtagttaagatatttgggaagcgtaaattgatcttatcatcactcttcgcttcagct 453
Query: 1476 tgtagcagtcttgctttgagtatatatgcgggagttgtgctgccggttagcgtattttca 1535
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 454 tgtagcagtcttgctttgagtgtatatgcgggagttgagctgccggttagcgtattttca 513
Query: 1536 tacgaaccgagtacatttccaagtcaaacggaaattattcctgttatactatttatgtcg 1595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tacgaaccgagtacatttccaagtcaaacggaaattattcctgttatactatttatgtct 573
Query: 1596 ctagtgtgtttcaccagcttaggtataccatggatcctactctccgaagtctttcctttc 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ctagtgtgtttcaccagcttaggtataccatggatcctactctccgaagtctttcctttc 633
Query: 1656 aggagtcgtggtatggctacgggtttggctgccgctttaagctacctcattttcttcgca 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aggagtcgtggtatggctacgggtttggctgccgctttaagctacctcattttcttcgca 693
Query: 1716 gcagcaaaatccaattacaacattgaggaaaatttccacatgagcggctcctttatgact 1775
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gcagcannntccaattacaacattgaggaaaatttccacatgagcggctcctttatgact 753
Query: 1776 tatgccata 1784
|||||||||
Sbjct: 754 tatgccata 762
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,212
Number of extensions: 13084
Number of successful extensions: 13084
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13084
Number of HSP's successfully gapped: 1
Length of query: 2470
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2453
Effective length of database: 8,119,229
Effective search space: 19916468737
Effective search space used: 19916468737
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)