BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09064 (UTR included)
(2431 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2329_C1 718 0.0
>BF14_2329_C1
Length = 829
Score = 718 bits (362), Expect = 0.0
Identities = 409/422 (96%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 2012 tatttttaaacgtaacctttaacttaactgattgcatgtatcattaaaaactttctaata 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tatttttaaacgtaacctttaacttaactgattgcatgtatcattaaaaactttctaata 770
Query: 2072 tttgataagaaaaataattttagatgaagaatctgaggcctgtttcctttcgtaatattt 2131
|||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 769 tttgataacaaaaataattttagattaagaagctgaggcctgtttcctttcggaatattt 710
Query: 2132 cgatggcagtatgatatcatgatatgatttgtatcttgatatgataatatcatgatatga 2191
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 709 ctatggcagtatgatatcatgatatgatttgtatcttgatatgatcatatcatgatatga 650
Query: 2192 tttgtgttaaatataacgtttgttatcaatataagctatgtctttatgcccat-gctaaa 2250
|||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||
Sbjct: 649 tttgtgttaaatataacgtttgttatcaatataagcgatgtctttatgtccatatttaaa 590
Query: 2251 gtatatgtcgtaacacagagggtat-aaaactatcagtcctataattaaatgaataaaca 2309
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 589 gtatatgtcgtaacacagagggtgtaaaaactatcagtcctataattaaatgaataaaca 530
Query: 2310 cgtaatatatataagtgtaagaataaaaaatcaagttaactatctgtagtagaaaactta 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cgtaatatatataagtgtaagaataaaaaatcaagttaactatctgtagtagaaaactta 470
Query: 2370 acatgaaattatcacttagatgggtcttcaattttggctataaacaaaggaatagcgaat 2429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acatgaaattatcacttagatgggtcttcaattttggctataaacaaaggaatagcgaat 410
Query: 2430 tg 2431
||
Sbjct: 409 tg 408
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,998
Number of extensions: 10081
Number of successful extensions: 10081
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10077
Number of HSP's successfully gapped: 1
Length of query: 2431
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2414
Effective length of database: 8,119,229
Effective search space: 19599818806
Effective search space used: 19599818806
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)