BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09073 (UTR included)
(2167 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1E01 347 5e-95
>BF01035X1E01
Length = 821
Score = 347 bits (175), Expect = 5e-95
Identities = 427/511 (83%)
Strand = Plus / Plus
Query: 448 aagcgtgttttactgctgcctacatgttgccattattccttttaattcatagtatggcgt 507
||||||| |||||| ||||| |||||| || || |||||| ||||||| ||||||| |
Sbjct: 35 aagcgtggattactgttgccttcatgttacctttgttccttctaattcacggtatggcct 94
Query: 508 ctcggggaagaatattttgtaggaatacaaggcctaagaaatccttcaagatagaactcg 567
|||| || ||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 95 ctcgagggagaatgttttgtaggaatacaagacccaagaaatccttcaagatagaactcg 154
Query: 568 gtaatgcaacctgcaggacctgtggttgcaccgggagtttaggatctctatttaccgacg 627
| | || ||||||||||||||||| ||||| ||||||||||||||||||||| | |
Sbjct: 155 gcagtgggtcctgcaggacctgtggtagcaccaggagtttaggatctctatttagtggag 214
Query: 628 gccgtaatcacgaaaaaagatctgaagaattacgcattgtgactggtttaaccataaagt 687
|| | | | ||||||| ||||||| || |||| | || ||||||||| ||||
Sbjct: 215 gcgaaagtaaggaaaaaatatctgaacaactacggctagtaactggtttagtaataagac 274
Query: 688 ataacgatggactgtcgcaaaaaatatgtcgccgctgctacaggttcatcaaaagatcgc 747
|||||||||| | || ||||||||||||||||| |||||||| | | |
Sbjct: 275 ctaacgatggattatcccaaaaaatatgtcgccggtgctacagagcggttaggtctgcaa 334
Query: 748 taagattccggcgagtcagcaaaagaactgaaaagcttcgattcggtatgagagtgaaaa 807
||||| | | |||||||| | |||||||||||||||||| |||||||||| ||||| |
Sbjct: 335 taagactgagacgagtcagtagaagaactgaaaagcttcgtctcggtatgagggtgaaga 394
Query: 808 ctgagaatggaccaagactagcgatgacgacggttgtgaagacggaacctcaatcagaca 867
||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 395 ctgagaatgtaccaaaactagcgatgaatgaagctgtgaagacggaacctcaatcagaca 454
Query: 868 acttacaagccaacgactttggacaaatgggtttcattgacagatatcagaattacaact 927
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 455 acttacaagccaacgactttggacaaatgggcttcattgacagatatcagaattacaact 514
Query: 928 tccccgatctgtacgatatctgtaagaaaga 958
|||||||||||||||||||||||||||||||
Sbjct: 515 tccccgatctgtacgatatctgtaagaaaga 545
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,368
Number of extensions: 5285
Number of successful extensions: 5285
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5284
Number of HSP's successfully gapped: 3
Length of query: 2167
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2150
Effective length of database: 8,119,229
Effective search space: 17456342350
Effective search space used: 17456342350
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)