BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09075 (UTR included)
(1777 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2D12 696 0.0
BF01037B1H08 131 4e-30
BF01056B1D02 129 2e-29
BF01023A2A12 109 2e-23
BF01029B2F12 100 1e-20
BF01010B2F09 100 1e-20
>BF01024A2D12
Length = 765
Score = 696 bits (351), Expect = 0.0
Identities = 363/367 (98%)
Strand = Plus / Plus
Query: 889 aggaggggaaaattataccgtcgccagtagactatgtggacacctggaaggctatggagg 948
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aggaggggaaaattataccatcgccagtagactatgtggacacctggaaggctatggagg 71
Query: 949 ccctggtcgacaaaggcctcaccaagagcatcggggtgtcgaacttcaacaagcgacaga 1008
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 72 ccctggtcgacaaaggcctcaccaagagcatcgggctgtcaaacttcaacaagcgacaga 131
Query: 1009 tcgatcgtgttatggaaatggcgagagtcaaaccagctatgttacagatcgaggtccacc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tcgatcgtgttatggaaatggcgagagtcaaaccagctatgttacagatcgaggtccacc 191
Query: 1069 catacctgaaccagtccaagctgttagagcattgctcgtcctacggtatctcggtgacgg 1128
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 catacctgaaccagtccaaactgttagagcattgctcgtcctacggtatctcggtgacgg 251
Query: 1129 cgtactctccgctcggctctcctgacagaccctgggccaagccggacgaccctcagctct 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgtactctccgctcggctctcctgacagaccctgggccaagccggacgaccctcagctct 311
Query: 1189 tggaggaccagcggctcaagaacattgccagtcgatatagcaaaacaccagctcaagtac 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tggaggaccagcggctcaagaacattgccagtcgatatagcaaaacaccagctcaagtac 371
Query: 1249 tcgttag 1255
|||||||
Sbjct: 372 tcgttag 378
>BF01037B1H08
Length = 758
Score = 131 bits (66), Expect = 4e-30
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 1298 ggcctggaagttaaagacccgactctcaaacacgagagctcgggttcgaaacctggcaag 1357
|||||||| ||||||| |||| |||||| || || || ||||||||||||||||||||
Sbjct: 79 ggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaaacctggcaag 138
Query: 1358 taccaatgtgatgttttccgaatcatatgtactttctaagagtgtttagacaccactgac 1417
|||||||||||| |||||||| ||||||||||||||||||| | ||||| ||||||||||
Sbjct: 139 taccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtcaccactgac 198
Query: 1418 gg 1419
||
Sbjct: 199 gg 200
>BF01056B1D02
Length = 778
Score = 129 bits (65), Expect = 2e-29
Identities = 139/167 (83%), Gaps = 15/167 (8%)
Strand = Plus / Plus
Query: 1345 gaaacctggcaagtaccaatgtgatgttttccgaatcatatgtactttctaagagtgttt 1404
||||||||||||||||||||||||| |||||||| |||||||||||||||||| || ||
Sbjct: 510 gaaacctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagtt 569
Query: 1405 agacaccactgacg---------------gtgactaaacctggtcttataatttcaaatt 1449
|||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 570 agacaccactgacggtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaatt 629
Query: 1450 ataaaattaaaatcgccaacccgccttgagcgagcctggtgattaat 1496
|||| ||| |||||||||||||| ||||||| ||| ||||| |||||
Sbjct: 630 ataagattgaaatcgccaacccgtcttgagcaagcgtggtggttaat 676
>BF01023A2A12
Length = 723
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 1345 gaaacctggcaagtaccaatgtgatgttttccgaatcatatgtactttctaagagtgttt 1404
||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||
Sbjct: 105 gaaacctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtattt 164
Query: 1405 agacaccactgacgg 1419
|||||||||||||||
Sbjct: 165 agacaccactgacgg 179
>BF01029B2F12
Length = 749
Score = 99.6 bits (50), Expect = 1e-20
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 1338 cgggttcgaaacctggcaagtaccaatgtgatgttttccgaatcatatgtactttctaag 1397
|||||||||||||||||||||||||||||||| || | || |||||||||||||||||
Sbjct: 663 cgggttcgaaacctggcaagtaccaatgtgat-ttatgagagacatatgtactttctaag 605
Query: 1398 agtgtttagacaccactgacgg 1419
||| ||||||||||||||||||
Sbjct: 604 agtatttagacaccactgacgg 583
>BF01010B2F09
Length = 764
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 1338 cgggttcgaaacctggcaagtaccaatgtgatgttttccgaatcatatgtactttctaag 1397
||||||||||||||| |||||||||||||||| || ||| ||||||||||||||||||
Sbjct: 502 cgggttcgaaacctgacaagtaccaatgtgatcttcatcgagtcatatgtactttctaag 443
Query: 1398 agtgtttagacaccactgacgg 1419
||| ||||||| ||||||||||
Sbjct: 442 agtatttagacgccactgacgg 421
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,721
Number of extensions: 6292
Number of successful extensions: 6292
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6292
Number of HSP's successfully gapped: 9
Length of query: 1777
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1760
Effective length of database: 8,119,229
Effective search space: 14289843040
Effective search space used: 14289843040
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)