BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09106 (UTR included)
(1199 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2843_C1 521 e-148
>BF14_2843_C1
Length = 786
Score = 521 bits (263), Expect = e-148
Identities = 283/289 (97%), Gaps = 3/289 (1%)
Strand = Plus / Plus
Query: 499 aggtgcagtcggtgctgaagaacatcgtccgcgactggagcgcggcgggggaagtggagc 558
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 aggtgcagtcggtgctgaagaacatcgtccgcgactggagcgcggcgggcgaagtggagc 557
Query: 559 gcgaccagtgctacaagcccatcctggacgagctggaggagaggtatcctcgccaggaac 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcgaccagtgctacaagcccatcctggacgagctggaggagaggtatcctcgccaggaac 617
Query: 619 actgc---cggtcgtcggtccgcgtgctggttccgggcgcgggcctgggtcgcctcgcct 675
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 actgcagccggtcgtcggtccgcgtgctggttccgggcgcgggcctgggtcgcctcgcct 677
Query: 676 gggaggtggccggccgagggttctcgtgtcaggggaacgagttctcgctcttcatgttgt 735
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 678 gggaggtggccggccgagggttctcatgtcaggggaacgagttctccctcttcatgttgt 737
Query: 736 tcgccagcaacttcatactcaataagtgtgtcgaagcgaactcgtacac 784
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcgccagcaacttcatactcaataagtgtgtcgaagcgaactcgtacac 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 112,642
Number of extensions: 1963
Number of successful extensions: 1963
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1962
Number of HSP's successfully gapped: 1
Length of query: 1199
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1182
Effective length of database: 8,119,229
Effective search space: 9596928678
Effective search space used: 9596928678
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)