BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09126 (UTR included)
(2010 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 101 4e-21
BF01049B1F01 96 3e-19
BF14_335_C4 86 3e-16
BF01014B2F02 80 2e-14
BF14_335_C2 80 2e-14
BF01016A2B02 72 4e-12
BF14_335_C5 68 6e-11
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 4e-21
Identities = 71/77 (92%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 97 acctacacctgggtcgcaagtcccaggcaccgttgaagctcctctccctgcatc---atg 153
||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||
Sbjct: 473 acctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgatg 414
Query: 154 gacccggcacccgcacg 170
|||||||||||||||||
Sbjct: 413 gacccggcacccgcacg 397
>BF01049B1F01
Length = 840
Score = 95.6 bits (48), Expect = 3e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 97 acctacacctgggtcgcaagtcccaggcaccgttgaagctcctctccctgca 148
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 3e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 97 acctacacctgggtcgcaagtcccaggcaccgttgaagctcctctcc 143
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1256 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 100 tacacctgggtcgcaagtcccaggcaccgttgaagctcctctccctgcatc-atggaccc 158
|||||||||||||||||||| |||| | | ||||||||||||||||||| | |||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 159 ggcacccgcacg 170
||||||||||||
Sbjct: 563 ggcacccgcacg 552
>BF14_335_C2
Length = 1827
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 97 acctacacctgggtcgcaagtcccaggcaccgttgaagctcctctccctgca 148
||||||||||| ||||||| |||||||||| |||||||||||||||||||||
Sbjct: 917 acctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgca 866
>BF01016A2B02
Length = 780
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 98 cctacacctgggtcgcaagtcccaggcaccgttgaagctcctctccct 145
|||||||||| ||||||| |||||||||| ||||||||||||||||||
Sbjct: 277 cctacacctgagtcgcaattcccaggcactgttgaagctcctctccct 230
>BF14_335_C5
Length = 1597
Score = 67.9 bits (34), Expect = 6e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 110 tcgcaagtcccaggcaccgttgaagctcctctccctgc-atcatggacccggcacccgca 168
||||||||||||||||| |||||||||||||||| ||| | ||| ||||||||||||||
Sbjct: 1517 tcgcaagtcccaggcactgttgaagctcctctccgtgcaaagatgcacccggcacccgca 1576
Query: 169 cg 170
||
Sbjct: 1577 cg 1578
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,616
Number of extensions: 4549
Number of successful extensions: 4549
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 4546
Number of HSP's successfully gapped: 7
Length of query: 2010
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1993
Effective length of database: 8,119,229
Effective search space: 16181623397
Effective search space used: 16181623397
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)