BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09145 (UTR included)
(1930 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2B01 924 0.0
BF01032A2C01 587 e-167
BF01047B2H03 254 5e-67
BF01060B1D11 222 2e-57
>BF01039B2B01
Length = 833
Score = 924 bits (466), Expect = 0.0
Identities = 469/470 (99%)
Strand = Plus / Plus
Query: 628 atatgaaaagtggtctagtgcgtaaatacaatataacgccggaagattaccacatgatag 687
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 atatgaaaagtggtctagtgcgtaaatacaatataactccggaagattaccacatgatag 423
Query: 688 agattgtcataattgagaacaagcctcataaggctggtccacagtggaagtttgcgggag 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agattgtcataattgagaacaagcctcataaggctggtccacagtggaagtttgcgggag 483
Query: 748 cattctactttgcaaccgttgtactagctatgataggatatggccattccacacctgtaa 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cattctactttgcaaccgttgtactagctatgataggatatggccattccacacctgtaa 543
Query: 808 ctgttggagggaaagcattttgtatggcttatgctatggtgggtattcctttggggcttg 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctgttggagggaaagcattttgtatggcttatgctatggtgggtattcctttggggcttg 603
Query: 868 tgatgtttcaaagtattggtgaacgtctgaataagtttgcatcagtcgtaataagacgag 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tgatgtttcaaagtattggtgaacgtctgaataagtttgcatcagtcgtaataagacgag 663
Query: 928 caaagtgctatcttcgttgtaacacaacggaggctacggagatgaatttgatgtttgcaa 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 caaagtgctatcttcgttgtaacacaacggaggctacggagatgaatttgatgtttgcaa 723
Query: 988 ctggaatgctgtcctctataattataacaactggagcagccgttttctctcgttacgagg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctggaatgctgtcctctataattataacaactggagcagccgttttctctcgttacgagg 783
Query: 1048 gatggagttatttcgatagcttttattactgctttgtgacgctcacgact 1097
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gatggagttatttcgatagcttttattactgctttgtgacgctcacgact 833
Score = 337 bits (170), Expect = 4e-92
Identities = 180/182 (98%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 447 tttggtctcttatagactaaaactctcaacaagcactgagatcagcaaagcactatgaaa 506
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tttggtctct-atagactaaaactctcaacaagcactgagatcagcaaagcactatgaaa 188
Query: 507 aggcaaaacgttcgtacactgtcgcttgtcgtttgtacgttcacatatttgctgatagga 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aggcaaaacgttcgtacactgtcgcttgtcgtttgtacgttcacatatttgctgatagga 248
Query: 567 gcagctgttttcgatgcattggaatcagatacagaaagcaagagatgggaggttctatcg 626
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcagctgttttcgacgcattggaatcagatacagaaagcaagagatgggaggttctatcg 308
Query: 627 ga 628
||
Sbjct: 309 ga 310
Score = 212 bits (107), Expect = 2e-54
Identities = 119/123 (96%)
Strand = Plus / Plus
Query: 254 ttttgacattataatttttatatttcattgttatattttttaatattattgcttaaggta 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7 ttttgacattataatttttatatttcattgttatattttttaatattattgcttaagtta 66
Query: 314 attaacaaaaaataacttttaactaagaactgttatcagttattccaggacaaacttttc 373
||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 67 tttaacaacaaataacttttaactaagaactgttatcagttattccaggacaaacatttc 126
Query: 374 cat 376
|||
Sbjct: 127 cat 129
>BF01032A2C01
Length = 796
Score = 587 bits (296), Expect = e-167
Identities = 314/320 (98%)
Strand = Plus / Plus
Query: 1354 gtcttggcaacaaacagtgttctggaccacggacgagtgagattccgtctgacctaatag 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcttggcaacaaacagtgttctggaccacggacgagtgagattccgtctgacctaatag 60
Query: 1414 aaagggcatccgtctaaatacaatacgaaaacagtaacatataaaggcacacaaaattca 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagggcatccgtctaaatacaatacgaaaacagtaacatataaaggcacacaaaattca 120
Query: 1474 aacgacaacagattaaaaatgtcttcaaggtaataaaatgccaaaaagaaaagtttgtag 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgacaacagattaaaaatgtcttcaaggtaataaaatgccaaaaagaaaagtttgtag 180
Query: 1534 ctatgttataaaatattattgttcgatttaaaactaattttaagttgttttcctcttaat 1593
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 ctatgttataaaatattattgttcgatttaaaactaattctaagttgttttcctcttaat 240
Query: 1594 ttgtgattactgatttttaacaaaccatctttttttctactcatacatgttataaataat 1653
|||||||||||||||||||| | |||||||||| ||||||| |||||||| |||||||||
Sbjct: 241 ttgtgattactgatttttaatataccatcttttgttctacttatacatgtcataaataat 300
Query: 1654 tatttgacatgagtaatatg 1673
||||||||||||||||||||
Sbjct: 301 tatttgacatgagtaatatg 320
>BF01047B2H03
Length = 758
Score = 254 bits (128), Expect = 5e-67
Identities = 222/252 (88%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 1680 gatgagtctaaaaaggccatcggagctctataaacacctgagagtttccaagaggtacat 1739
||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 1740 cttggggaaatcccaggatgacgtcgttacatcgctcccaaaagacaaagatgccccaga 1799
| ||||||| |||| |||| ||| ||||||| ||| ||||| | | ||||||||| ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 1800 gctagagtcaaggcttcaattccacaagcagtttatgataggagcgcaaagtaac-agag 1858
||| ||||||| ||||||||||| || ||||||||||||||||| ||||||||| ||||
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagag 579
Query: 1859 tagggttagggtcaagtaggaaggtccaagatacggatatattgaagtcttttattcggc 1918
|||| ||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 578 taggattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggc 519
Query: 1919 aagacgagaatg 1930
||||||||||||
Sbjct: 518 aagacgagaatg 507
>BF01060B1D11
Length = 799
Score = 222 bits (112), Expect = 2e-57
Identities = 225/260 (86%), Gaps = 2/260 (0%)
Strand = Plus / Minus
Query: 1673 gttttgggatgagtctaaaaaggccatcggagctctataaacacctgagagtttccaaga 1732
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 594 gttttgggatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaaga 535
Query: 1733 ggtacatcttggggaaatcccaggatgacgtcgttacatcgctcccaaaagacaaagatg 1792
| | ||| ||||||| |||| |||| ||| ||||||| ||||||||| | |||||
Sbjct: 534 gacatatcccggggaaagcccataatgatgtcattacatcactcccaaaaaccggagatg 475
Query: 1793 ccccagagctagagtc-aaggcttcaattccacaagcagtttatgataggagcgcaaagt 1851
|||||| ||| |||| || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 474 gcccagaactaaagtctgagacttcaattccacaaacagtttatgataggagcacaaagt 415
Query: 1852 aac-agagtagggttagggtcaagtaggaaggtccaagatacggatatattgaagtcttt 1910
||| |||||||| ||||| ||||| | ||||| ||||||| |||||||||||||| |||
Sbjct: 414 aacgagagtaggattaggatcaaggaagaaggctcaagatatggatatattgaagtattt 355
Query: 1911 tattcggcaagacgagaatg 1930
||||| ||||||||||||||
Sbjct: 354 tattcagcaagacgagaatg 335
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,726
Number of extensions: 5214
Number of successful extensions: 5214
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5211
Number of HSP's successfully gapped: 6
Length of query: 1930
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1913
Effective length of database: 8,119,229
Effective search space: 15532085077
Effective search space used: 15532085077
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)