BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09161 (UTR included)
(2017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2C11 1467 0.0
>BF01032A2C11
Length = 779
Score = 1467 bits (740), Expect = 0.0
Identities = 770/779 (98%), Gaps = 1/779 (0%)
Strand = Plus / Plus
Query: 559 atcaaatcgtacaatcaagtagatttactgttcaaaacgatttgacaaggc-ggcaaata 617
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1 atcaaatcgtacaatcaagtagatttactcttcaaaacgatttgacaaggnnggcaaata 60
Query: 618 gataaaattccaattaaactttcttcgattgtatgtttttattcatcagatagtaagaag 677
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 gataaaattccaattaaactttcttcgattgtatgtttttattcatctgatagtaagaag 120
Query: 678 catttcttagaaatagaaaagaaggcagagtcaatcaaaaatgtattcgaacaaaaaaag 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttcttagaaatagaaaagaaggcagagtcaatcaaaaatgtattcgaacaaaaaaag 180
Query: 738 gtacaaattaaggataccgaacaaaaaattagacagaaaggtgaagaattggttaaagat 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtacaaattaaggataccgaacaaaaaattagacagaaaggtgaagaattggttaaagat 240
Query: 798 ttaagacaccagaaggaagtcacagggcaaatattaaaattaaaaaaagatcatctggta 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaagacaccagaaggaagtcacagggcaaatattaaaattaaaaaaagatcatctggta 300
Query: 858 aaagatatactagagacgaaagcaaaagtaagagaaaaaattgaaggagttgtagaaaga 917
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 aaagatatactagagacgaaagcaaaagttagagaaaaaattgaaggagttgtagaaaga 360
Query: 918 gaaaacatattcacaattccaaatgttttatgtgttgctaggatagcaatgtctccatat 977
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 gaaaacatattcacaattccaaatgttttatgtgttgctaggatagcaatgtctccctat 420
Query: 978 ttgggatatgtaattctgcaagataattataacttggctctaggattgcttgtttttgca 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgggatatgtaattctgcaagataattataacttggctctaggattgcttgtttttgca 480
Query: 1038 ggttttacagatttgcttgatggttacatagctcggaattgggaaggtcaatcatctaaa 1097
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttttacagatgtgcttgatggttacatagctcggaattgggaaggtcaatcatctaaa 540
Query: 1098 atgggatcttttcttgatccaatggctgataaagtattgatagcaactctcttcataagt 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgggatcttttcttgatccaatggctgataaagtattgatagcaactctcttcataagt 600
Query: 1158 cttacatggcaagaattaataccactttatctaacacttctgatagtggctcgagacgca 1217
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 cttacatggcaagaattaataccactgtatctaacacttctgatagtggctcgagacgca 660
Query: 1218 gcactagttgcggccggttttgtcatcagatatataagtttacctccgccaaaaactctg 1277
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 661 gcactagttgcggccggttttgtcttcagatatataagtttacctccgccaaaaactctg 720
Query: 1278 agtcggtattttgacgctacacacgcgactgcccaattagcgcccacattcattagcaa 1336
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agtcggtattttgacgctacacacgcgactgcccaattagcgcccacattcattagcaa 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,446
Number of extensions: 6990
Number of successful extensions: 6990
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6989
Number of HSP's successfully gapped: 1
Length of query: 2017
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2000
Effective length of database: 8,119,229
Effective search space: 16238458000
Effective search space used: 16238458000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)