BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09165 (UTR included)
(1882 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1D11 283 5e-76
BF01047B2H03 270 7e-72
BF01031B1D09 98 6e-20
BF01048A1E10 74 9e-13
>BF01060B1D11
Length = 799
Score = 283 bits (143), Expect = 5e-76
Identities = 359/427 (84%), Gaps = 13/427 (3%)
Strand = Plus / Minus
Query: 281 tgttgaagttgtggctcgggctcgcgcttacggctgattcatcggctttatttagggatg 340
||||||| ||||||||| |||||||| || ||||| | ||||||||| ||||||||
Sbjct: 660 tgttgaatttgtggctccggctcgcgacatcgactgatacgtcggctttaattagggatc 601
Query: 341 acaatagttttgggataagtctaataaggccatcgaagctttataaacacctgagagttt 400
||||||||||||||| ||||||| |||||||||| |||| ||||||||| | |||||||
Sbjct: 600 gcaatagttttgggatgagtctaaaaaggccatcggagctctataaacacttaagagttt 541
Query: 401 ccaagagatatattctgggaaa--cccatgacgacgtcgttacatcgcttccaaaagaca 458
|||||||| |||| | ||| || ||||| | || ||| ||||||| || |||||| |
Sbjct: 540 ccaagagacatatcccggggaaagcccataatgatgtcattacatcactcccaaaaaccg 481
Query: 459 aagatgccccagagcta------gaggcttcaattccataagcagtttatgataggagca 512
||||| |||||| ||| ||| ||||||||||| || ||||||||||||||||||
Sbjct: 480 gagatggcccagaactaaagtctgagacttcaattccacaaacagtttatgataggagca 421
Query: 513 cgaagtaac-agagtagggttaggatcaagtgcgaaggtccaagatacggatatattgaa 571
| ||||||| |||||||| ||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 420 caaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatggatatattgaa 361
Query: 572 gtcttttattcggcaagacgagaatgataaatataagatccatgcaataagtttagaaat 631
|| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct: 360 gtattttattcagcaagacgagaatgatggatataagatccatgcaatgcgtttagagat 301
Query: 632 gcagaacgagtggttagacatag-gagatttttgcatcccattagcactaaaatggcgca 690
||||||||||||||||||||||| |||| || ||| ||||||||| ||||||||||||
Sbjct: 300 gcagaacgagtggttagacatagagaga---ttccattccattagcaataaaatggcgca 244
Query: 691 ccttaat 697
|||||||
Sbjct: 243 ccttaat 237
Score = 87.7 bits (44), Expect = 6e-17
Identities = 93/109 (85%), Gaps = 4/109 (3%)
Strand = Plus / Minus
Query: 754 tcccagatcagagtaatttagtaaga----tggggtaaaggtaccgaaaagacttgctat 809
|||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 810 atctgtgggaaggcagttggaactgctaggcacttgttagtgggatgta 858
|| || | |||||||||||||| ||||| ||| ||| | |||||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgta 126
>BF01047B2H03
Length = 758
Score = 270 bits (136), Expect = 7e-72
Identities = 299/349 (85%), Gaps = 12/349 (3%)
Strand = Plus / Minus
Query: 358 agtctaataaggccatcgaagctttataaacacctgagagtttccaagagatatattctg 417
||||||| |||||||||| |||| ||||||||| | ||||||||||||||| |||| | |
Sbjct: 754 agtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatatcccg 695
Query: 418 ggaaa--cccatgacgacgtcgttacatcgcttccaaaagacaaagatgccccagagcta 475
|| || ||||| | || ||| ||||||| || ||||| | | ||||||||| || |||
Sbjct: 694 gggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctgaacta 635
Query: 476 gaggc-----ttcaattccataagcagtttatgataggagcacgaagtaac-agagtagg 529
|| | ||||||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 634 aagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagagtagg 575
Query: 530 gttaggatcaagtgcgaaggtccaagatacggatatattgaagtcttttattcggcaaga 589
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 574 attaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggcaaga 515
Query: 590 cgagaatgataaatataagatccatgcaataagtttagaaatgcagaacgagtggttaga 649
|||||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 514 cgagaatgatggatataacatccatgcaatgagtttagatatgcagaacgagtggttaga 455
Query: 650 catag-gagatttttgcatcccattagcactaaaatggcgcaccttaat 697
||||| |||| || ||| ||||||||| |||||||||||||||||||
Sbjct: 454 catagagaga---ttccattccattagcaataaaatggcgcaccttaat 409
Score = 200 bits (101), Expect = 6e-51
Identities = 302/365 (82%), Gaps = 3/365 (0%)
Strand = Plus / Minus
Query: 801 acttgctatatctgtgggaaggcagttggaactgctaggcacttgttagtgggatgtaag 860
|||||||||||||| | | |||||||||||| |||| ||| ||| | ||||||||| |
Sbjct: 364 acttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtagg 305
Query: 861 gtactcctcgatagcggtcaatactcgcg-tcgtcacgatagggttctagaaatcatacg 919
||||||| |||||||||||||||| || || || ||||||||| || | ||||||
Sbjct: 304 ctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcataca 245
Query: 920 tgaagcggttagtctttcggtagccagagcgcaaaaaggaataaccacaaacgagcgatc 979
||||||||||||| ||| ||||| || ||| |||||| |||||||||||||| |||||
Sbjct: 244 tgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgatt 185
Query: 980 agtaggttttgtgagagagggcactagggctataaaaacaaatgttaagccttactccat 1039
| | |||||||||||||| | || |||||||||||| |||| | ||||||||||| ||
Sbjct: 184 aattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctat 125
Query: 1040 ccttaaagcggctacggattggactataatgatggatacgtgtgaaaaacaatacaaaat 1099
||||||||||| | ||||||| |||||||| |||||||||| || ||| |||||||||
Sbjct: 124 ccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaat 65
Query: 1100 ccccgaggatatttgtgcgtcggcctccagaccggacata-ttcatgtattcgcgaatct 1158
||||||| ||| ||||| ||||| |||||||| |||||| || || ||||||||||| |
Sbjct: 64 ccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaattt 6
Query: 1159 taaag 1163
|||||
Sbjct: 5 taaag 1
>BF01031B1D09
Length = 754
Score = 97.6 bits (49), Expect = 6e-20
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 1228 cgtcgcccatggacatccgcaacatag-tttacggaagtgttgccacccttgatttgggg 1286
|||| |||||||||||||||||||| | ||| | || ||||| || |||||||| |||
Sbjct: 715 cgtcacccatggacatccgcaacatcgatttgcagatgtgtttcccgccttgattgggga 656
Query: 1287 agagggaaaggaaaaggtgggaaagtgagggaaaagggaaagggc 1331
|||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 655 agaggggaaggaaaaggtgggaaagggagggaaaagggaaagggc 611
>BF01048A1E10
Length = 804
Score = 73.8 bits (37), Expect = 9e-13
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 1231 cgcccatggacatccgcaacatag-tttacggaagtgttgccacccttgatttggggaga 1289
|||||||||||||||||||||||| ||| || | ||||||||||||||| || || |||
Sbjct: 479 cgcccatggacatccgcaacatagttttgcgaatgtgttgccacccttgtttgggaaaga 538
Query: 1290 gggaaaggaaaaggtgggaaa 1310
|||| |||||| |||||||||
Sbjct: 539 gggataggaaagggtgggaaa 559
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,558
Number of extensions: 3822
Number of successful extensions: 3822
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3815
Number of HSP's successfully gapped: 7
Length of query: 1882
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1865
Effective length of database: 8,119,229
Effective search space: 15142362085
Effective search space used: 15142362085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)