BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09179 (UTR included)
(2878 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A2B04 1049 0.0
BF01029A1A06 735 0.0
BF14_729_C3 80 2e-14
>BF01021A2B04
Length = 805
Score = 1049 bits (529), Expect = 0.0
Identities = 560/568 (98%), Gaps = 3/568 (0%)
Strand = Plus / Plus
Query: 2314 agatggaagagaaacgcgtctcaccgaaagctgtatcagataggggagtgaaagagatgg 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agatggaagagaaacgcgtctcaccgaaagctgtatcagataggggagtgaaagagatgg 213
Query: 2374 attgattagaaaaagtatgaggttagttatgacatattatatattataataatttatata 2433
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 214 attgattagaaaaagtatgaggttagttatgtcatattatatataataataatttatata 273
Query: 2434 atacgtataaattaaacccttgccttgattgcagataatgaagtttttgtttaaaaatgt 2493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atacgtataaattaaacccttgccttgattgcagataatgaagtttttgtttaaaaatgt 333
Query: 2494 ccgaagtatcatttctattcaagtattacaatgagtgtgttcggagaaaaaaaa-tattt 2552
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 334 ccgaagtatcatttctattcaagtattacaatgagtgtgttcggagaaaaaaaaatattt 393
Query: 2553 aattttatttacaacctatttattgacagatttttttttttatttatatcgttatatttt 2612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aattttatttacaacctatttattgacagatttttttttttatttatatcgttatatttt 453
Query: 2613 --tttttgaaagtacaaaatttttgtataaacaattttagttaccgatgacaatccctaa 2670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tttttttgaaagtacaaaatttttgtataaacaattttagttaccgatgacaatccctaa 513
Query: 2671 ctataatggcgccaaagttgacgctgtcagattgttgacagttgtaagtttcgaagtgga 2730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctataatggcgccaaagttgacgctgtcagattgttgacagttgtaagtttcgaagtgga 573
Query: 2731 tctccgattttcatgtttgataaattaatatattgatacattatgtgatcggtgtgttta 2790
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tctccgattttcatattaaataaattaatatattgatacattatgtgatcggtgtgttta 633
Query: 2791 cttgcatttgttttgtggaataatgtgtttatactgaatataaatggttgattagttgtt 2850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cttgcatttgttttgtggaataatgtgtttatactgaatataaatggttgattagttgtt 693
Query: 2851 tgcgacaaaacatttgtttgtaacgagt 2878
||||||||||||||||||||||||||||
Sbjct: 694 tgcgacaaaacatttgtttgtaacgagt 721
>BF01029A1A06
Length = 739
Score = 735 bits (371), Expect = 0.0
Identities = 389/395 (98%)
Strand = Plus / Plus
Query: 1428 gtactgccttttgggatcgatgtcggaatattgggtgtagctgcgtattacattacgaga 1487
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 149 gtactgccttttgggatcgatgtcggaatattgggtgtagctgcgtattatattacgaga 208
Query: 1488 ttaaagagaccgcatcaggcagctatcgaggaagtattcggtcctgagcccagttccaaa 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttaaagagaccgcatcaggcagctatcgaggaagtattcggtcctgagcccagttccaaa 268
Query: 1548 gaaggttcgctgtatccagaaaaagttgtaaaatgcatcgcccacagaggcgctggcttg 1607
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 269 gaaggttcgctgtatccagaaaaagttgtaaaatgcatcgcccacaggggcgctggcttg 328
Query: 1608 gacgctccggaaaatacattacaagcttttaaatattgtgtggaaagggattgtacgttt 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gacgctccggaaaatacattacaagcttttaaatattgtgtggaaagggattgtacgttt 388
Query: 1668 gttgaattggatgtgagaacttcgagagacggccaactggttctgttacatgaccaagga 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttgaattggatgtgagaacttcgagagacggccaactggttctgttacatgaccaagga 448
Query: 1728 ctggaacggcttaccggcacaaacatatcagacgtgaggatcatggattgggagaaaatt 1787
||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctggaacggctgactggcacgaatatatcagacgtgaggatcatggattgggagaaaatt 508
Query: 1788 aagaagatcgacgtcggcaccaatcatccaaatag 1822
|||||||||||||||||||||||||||||||||||
Sbjct: 509 aagaagatcgacgtcggcaccaatcatccaaatag 543
Score = 157 bits (79), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 1855 aggtcatcaatggtatactggacatctttgctggacatccagatctctacaaatctgctg 1914
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 648 aggtcatcaatggtatactggacatctttgctggacatccagatctctannnatcggctg 707
Query: 1915 tggtaaccaccttcaatccgtttgtcctgtat 1946
||||||||||||||||||||||||||||||||
Sbjct: 708 tggtaaccaccttcaatccgtttgtcctgtat 739
>BF14_729_C3
Length = 2041
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 262 tacataatcccgacgtgtcgtttactctgcagcagccgtgatcacgggcagacgag 317
|||||||||||||||| ||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 1644 tacataatcccgacgtttcggttactttgcagcaaccgtgatcacgggcagacgag 1589
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 387,626
Number of extensions: 15060
Number of successful extensions: 15060
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 15057
Number of HSP's successfully gapped: 4
Length of query: 2878
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2861
Effective length of database: 8,119,229
Effective search space: 23229114169
Effective search space used: 23229114169
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)