BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09183 (UTR included)
(1903 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B1C11 1342 0.0
>BF01029B1C11
Length = 712
Score = 1342 bits (677), Expect = 0.0
Identities = 698/705 (99%)
Strand = Plus / Plus
Query: 387 tatctttctattaacaatcaaaaagaattccaaacactattacaaaagaagtgccctcat 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tatctttctattaacaatcaaaaagaattccaaacactattacaaaagaagtgccctcat 67
Query: 447 aaattagacattggcgctgtctacaacacaaagccatccattgggcgccatgatgcagtt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aaattagacattggcgctgtctacaacacaaagccatccattgggcgccatgatgcagtt 127
Query: 507 gtgctgtccagggaacttgtgttcgatattgatcttacagattatgatgaagtacgaact 566
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 128 gtgctgtccagggaacttgtgtttgatattgatcttacagattatgatgaagtacgaact 187
Query: 567 tgttgtcaggaggccaaagtttgtaacaaatgctggaaatttattgtggtagcatgtgaa 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tgttgtcaggaggccaaagtttgtaacaaatgctggaaatttattgtggtagcatgtgaa 247
Query: 627 attattaacgctgctctgaaagatgattttggtttccagaatattctttgggttttctct 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 attattaacgctgctctgaaagatgattttggtttccagaatattctttgggttttctct 307
Query: 687 ggtagaagaggttgtcattgttgggtatcagactatgaagcaagaacactagatagtcct 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtagaagaggttgtcattgttgggtatcagactatgaagcaagaacactagatagtcct 367
Query: 747 ggtcgtgctgctattgctgattacctttgccttatttttggaggggaaaataaaaataag 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggtcgtgctgctattgctgattacctttgccttatttttggaggggaaaataaaaataag 427
Query: 807 aaagtacatcttggaagtgataacttgcactctagtataaagaggtctcttaatattatt 866
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 428 aaagtacatcttggaagtgataacttgcactctagtataaagaggtctctcaatataatt 487
Query: 867 gatagatatttccttgaaatactagaagatcaagattttttgtcaacttcggagggcaca 926
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 488 gatagatatttccttgagatactagaagatcaagattttttgtcaacttcggagggtaca 547
Query: 927 aaaaaatttctaaaaataataccagatgacaccttacgtaaacaagttgaagatagcttc 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aaaaaatttctaaaaataataccagatgacaccttacgtaaacaagttgaagatagcttc 607
Query: 987 ggaagaggattgtctactgttgacaaatgggaatgtttcatacaaacttactatcagttc 1046
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 608 ggaagaggatcgtctactgttgacaaatgggaatgtttcatacaaacctactatcagttc 667
Query: 1047 tgtaaagagaatattaacgctatcagaaaaatgaaatacctagtc 1091
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgtaaagagaatattaacgctatcagaaaaatgaaatacctagtc 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,202
Number of extensions: 5935
Number of successful extensions: 5935
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5935
Number of HSP's successfully gapped: 1
Length of query: 1903
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1886
Effective length of database: 8,119,229
Effective search space: 15312865894
Effective search space used: 15312865894
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)