BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09185 (UTR included)
(1699 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1_C1 1622 0.0
BF01017A2G06 264 4e-70
>BF14_1_C1
Length = 2703
Score = 1622 bits (818), Expect = 0.0
Identities = 827/830 (99%)
Strand = Plus / Plus
Query: 640 ataaaaaaatgtcatgtcaaaaattattatttaatataatatgtttgctggttgcgctac 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ataaaaaaatgtcatgtcaaaaattattatttaatataatatgtttgctggttgcgctac 806
Query: 700 agagcgtgaggtctgaggaacatccgccatggaagtggtcctgtgaggatggagcgtgta 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 agagcgtgaggtctgaggaacatccgccatggaagtggtcctgtgaggatggagcgtgta 866
Query: 760 agaagatgaaacatgaaccgggtagttcgggatcagcgctgtcactcgaggcctgcaaga 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 agaagatgaaacatgaaccgggtagttcgggatcagcgctgtcactcgaggcctgcaaga 926
Query: 820 tgttctgcaacgaatacggtcttctgtggcccaggccgacgggttataccgacttaggtc 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 tgttctgcaacgaatacggtcttctgtggcccaggccgacgggttataccgacttaggtc 986
Query: 880 gattcctgtccaagatcaatataaataatatagaattacaaatcgagaggcgtggaagat 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 gattcctgtccaagatcaatataaataatatagaattacaaatcgagaggcgtggaagat 1046
Query: 940 cagataatctgatgaacgctgccggtcagcgtttcaagaagttggtgtcactcgcagtgc 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 cagataatctgatgaacgctgccggtcagcgtttcaagaagttggtgtcactcgcagtgc 1106
Query: 1000 catccgggataataccaaaagcgaccgggaaatccgtctatgtgtacctggttaacgaaa 1059
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1107 catccgggataataccaaaagcgaccgggaaatccgtctatgtgtatcttgttaacgaaa 1166
Query: 1060 aacccgacgtcacggacttctcaatcgatttcgacgagagctacaggttgagagtgtccc 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 aacccgacgtcacggacttctcaatcgatttcgacgagagctacaggttgagagtgtccc 1226
Query: 1120 cggagtctaacgaccgtataaacgctacaatcgttgggaataacttcttcggtatcagac 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 cggagtctaacgaccgtataaacgctacaatcgttgggaataacttcttcggtatcagac 1286
Query: 1180 acggtctggagacgctatcgcagctcatcgtccacgatgagattaaaaatcatttgttga 1239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 acggtctggagacgctgtcgcagctcatcgtccacgatgagattaaaaatcatttgttga 1346
Query: 1240 tggtccgtgacgtcacaatcgatgataaacccgtgtacccttacagaggagtgttgttgg 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 tggtccgtgacgtcacaatcgatgataaacccgtgtacccttacagaggagtgttgttgg 1406
Query: 1300 acaccgcgaggaactatttctctatcgactccatcaaagagactatcgaggccatgagta 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1407 acaccgcgaggaactatttctctatcgactccatcaaagagactatcgaggccatgagta 1466
Query: 1360 gcgtgaaactgaacactttccactggcacatcacagacagccaaagtttccccttcgtat 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 gcgtgaaactgaacactttccactggcacatcacagacagccaaagtttccccttcgtat 1526
Query: 1420 ccaagagacggccagaactcactaaatacggagcttacagtcccagtaaa 1469
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 ccaagagacggccagaactcactaaatacggagcttacagtcccagtaaa 1576
Score = 202 bits (102), Expect = 1e-51
Identities = 105/106 (99%)
Strand = Plus / Plus
Query: 1470 gctgaaccttgggcgtcgtactgcgtggaacctccgtgcggtcaactgaaccctaccaag 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1712 gctgaaccttgggcgtcgtactgcgtggaacctccgtgcggtcaactgaaccctaccaag 1771
Query: 1530 gaggagttgtacgatgttctacaagacatctacacggatatggccg 1575
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1772 gaggagctgtacgatgttctacaagacatctacacggatatggccg 1817
Score = 182 bits (92), Expect = 1e-45
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 175 ctcggcgttgcaagtgcctttttcctgaacgcctcccgctctctcagaagtgctggatcc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ctcggcgttgcaagtgcctttttcctgaacgcctcccgctctctcagaagtgctggatcc 714
Query: 235 atatctatgagactatttttaactatacaaat 266
||||||||||||||||||||||||||||||||
Sbjct: 715 atatctatgagactatttttaactatacaaat 746
>BF01017A2G06
Length = 282
Score = 264 bits (133), Expect = 4e-70
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 1248 gacgtcacaatcgatgataaacccgtgtacccttacagaggagtgttgttggacaccgcg 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gacgtcacaatcgatgataaacccgtgtacccttacagaggagtgttgttggacaccgcg 179
Query: 1308 aggaactatttctctatcgactccatcaaagagactatcgaggccatgagtagcgtgaaa 1367
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aggaattatttctctatcgactccatcaaagagactatcgaggccatgagtagcgtgaaa 239
Query: 1368 ctgaacactttccactg 1384
|||||||||||||||||
Sbjct: 240 ctgaacactttccactg 256
Score = 204 bits (103), Expect = 3e-52
Identities = 122/128 (95%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 945 aatctgatgaacgctgccggtcagcgtttcaagaagttggtgtcactcgcagtgccatcc 1004
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 1 aatctgatgaacgctgccggccagcgtttccnnn-gttggtgtcactcgcagtgccatcc 59
Query: 1005 gggataataccaaaagcgaccgggaaatccgtctatgtgtacctggttaacgaaaaaccc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gggataataccaaaagcgaccgggaaatccgtctatgtgtacctggttaacgaaaaaccc 119
Query: 1065 gacgtcac 1072
||||||||
Sbjct: 120 gacgtcac 127
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 181,447
Number of extensions: 3858
Number of successful extensions: 3858
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3857
Number of HSP's successfully gapped: 5
Length of query: 1699
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1682
Effective length of database: 8,119,229
Effective search space: 13656543178
Effective search space used: 13656543178
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)