BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09186 (UTR included)
(1876 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1_C1 1425 0.0
>BF14_1_C1
Length = 2703
Score = 1425 bits (719), Expect = 0.0
Identities = 738/746 (98%)
Strand = Plus / Minus
Query: 471 atttgtatagttaaaaatagtctcatagatatggatccagcacttctgagagagcgggag 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atttgtatagttaaaaatagtctcatagatatggatccagcacttctgagagagcgggag 687
Query: 531 gcgttcaggaaaaaggcacttgcaacgccgagtgttgagaaaaagaagagagatgattcc 590
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 686 gcgttcaggaaaaaggcacttgcaacgccgagtgttgaaaaaaagaagagagatgattcc 627
Query: 591 tttaaagatgatagcaagaagaaatcgaaatcatcaagctcagcaaatgctgccccaaaa 650
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 626 tttaaagatgatagcaagaagaaatcaaaatcatcaagctcagcaaatgctgccccaaaa 567
Query: 651 attgatgccaccaattacaagacgatggctggcagttcctcctatcgttttggtgtgttg 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 attgatgccaccaattacaagacgatggctggcagttcctcctatcgttttggtgtgttg 507
Query: 711 gctcgcatcgtcagacacatgaagtccagacaccaagaaggggatgaccatccgctgtcg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctcgcatcgtcagacacatgaagtccagacaccaagaaggggatgaccatccgctgtcg 447
Query: 771 attgatgaaattttagatgaaacaaatcagttagatgttggaagtaaaattaaacagtgg 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 attgatgaaattttagatgaaacaaatcagttagatgttggaagtaaaattaaacagtgg 387
Query: 831 cttcagactgaagcgttacagaataatcctaaaatagagcacacatttgacggaaagttt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cttcagactgaagcgttacagaataatcctaaaatagagcacacatttgacggaaagttt 327
Query: 891 atatttaaaccagtttataaaattaaggacaagaaatcattactgagattactgaagcaa 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atatttaaaccagtttataaaattaaggacaagaaatcattactgagattactgaagcaa 267
Query: 951 catgatttaaaaggtctaggggggatttttctagaggacgtccaagaatcattgccgcac 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 catgatttaaaaggtctaggggggatttttctagaggacgtccaagaatcattgccgcac 207
Query: 1011 tgcgacagagcattgaaaagtttagcgcaagaaatattatacataacaagaccctcagat 1070
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 206 tgcgacagagcattgaaaagtttagcgcaagaaatattatacataacaagaccctcggat 147
Query: 1071 aaaaagaaaattttgttttataatgacaaaaccgccactttagatgttgacgaagagttt 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aaaaagaaaattttgttttataatgacaaaaccgccactttagatgttgacgaagagttt 87
Query: 1131 gtgaaattatggcgagccacggccgtagatgccatggacgacgccaagatagaggaatac 1190
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 gtnnnnntatggcgagccacggccgtagatgccatggacgacgccaagatagaggaatac 27
Query: 1191 ttggagaagcaaggcatcaaatcaat 1216
||||||||||||||||||||||||||
Sbjct: 26 ttggagaagcaaggcatcaaatcaat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,457
Number of extensions: 4517
Number of successful extensions: 4517
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4517
Number of HSP's successfully gapped: 1
Length of query: 1876
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1859
Effective length of database: 8,119,229
Effective search space: 15093646711
Effective search space used: 15093646711
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)