BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09196 (UTR included)
(1267 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_829_C1 525 e-149
>BF14_829_C1
Length = 879
Score = 525 bits (265), Expect = e-149
Identities = 271/273 (99%)
Strand = Plus / Plus
Query: 427 acgcgaactcattccatcagacctccaaatggatcgatgacgtgcgtaccgagcgtgggt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 acgcgaactcattccatcagacctccaaatggatcgatgacgtgcgtaccgagcgtgggt 452
Query: 487 cagacgtcatcatcatgctggtcggcaacaagacggacctctcggacaagaggcaggtct 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cagacgtcatcatcatgctggtcggcaacaagacggacctctcggacaagaggcaggtct 512
Query: 547 ccaccgaggacggagacaggaaggccaaggagctgaacgtcatgttcatagagaccagcg 606
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 513 ccaccgaggacggagacaggaaggctaaggagctgaacgtcatgttcatagagaccagcg 572
Query: 607 ccaaggcgggatacaacgtgaagcagctgttcagacgcgtcgcagcagctctgcccggca 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ccaaggcgggatacaacgtgaagcagctgttcagacgcgtcgcagcagctctgcccggca 632
Query: 667 tggactccacggagagcaagccgcctgaagaca 699
|||||||| ||||||||||||||||||||||||
Sbjct: 633 tggactccgcggagagcaagccgcctgaagaca 665
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 127,343
Number of extensions: 2158
Number of successful extensions: 2158
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2158
Number of HSP's successfully gapped: 1
Length of query: 1267
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1250
Effective length of database: 8,119,229
Effective search space: 10149036250
Effective search space used: 10149036250
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)